RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ZPBP2Q6X784 338 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 HERC2P3Q9BVR0 1158 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 GPR62Q9BZJ7 368 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 SMIM28A0A1B0GU29 152 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 ANKRD63C9JTQ0 380 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 H0YCG3 227 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 HNRNPDLO14979 420 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 CLDN3O15551 220 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 MBTPS2O43462 519 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 NR1I2O75469 434 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 MYBP10242 640 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 CASP1P29466 404 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 CASP5P51878 434 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 YARSP54577 528 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 KCNC3Q14003 757 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 FUT10Q6P4F1 479 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 HPS3Q969F9 1004 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 SNX27Q96L92 541 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 ACAP3Q96P50 834 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 PPP1R10Q96QC0 940 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 CDCA3Q99618 268 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 MRPL44Q9H9J2 332 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 CDH22Q9UJ99 828 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 RCOR1Q9UKL0 485 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 HCFC2Q9Y5Z7 792 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 A0A0C4DFX4 3053 aa16.23■□□□□ 0.19
RABGGTA-211ENST00000559850 POLR2DO15514 142 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 TADA2AO75478 443 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 EFEMP2O95967 443 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 SOD2P04179 222 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 CXCL8P10145 99 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 EPCAMP16422 314 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 CLCNKBP51801 687 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 GTF2BQ00403 316 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 MCL1Q07820 350 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 KCNA1Q09470 495 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 SLC10A6Q3KNW5 377 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 RESP18Q5W5W9 173 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 ATL3Q6DD88 541 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 ALKAL1Q6UXT8 129 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 RNF168Q8IYW5 571 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 TMEM87AQ8NBN3 555 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 C18orf25Q96B23 403 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 KLHL5Q96PQ7 755 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 CD320Q9NPF0 282 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 PANK4Q9NVE7 773 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 ADAM28Q9UKQ2 775 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 VCANP13611 3396 aa16.22■□□□□ 0.19
RABGGTA-211ENST00000559850 CARNS1A5YM72 827 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 I3L4J1 428 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 LILRB3O75022 631 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 GCNT3O95395 438 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 PIGRP01833 764 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 URODP06132 367 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 CNPP09543 421 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 GLUD2P49448 558 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 BMS1Q14692 1282 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 XKR4Q5GH76 650 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 HERC4Q5GLZ8 1057 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 ANKRD54Q6NXT1 300 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 ZNF720Q7Z2F6 126 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 MAP4K3Q8IVH8 894 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 C12orf76Q8N812 135 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 GLIS3Q8NEA6 775 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 SPATA32Q96LK8 384 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 BLZF1Q9H2G9 400 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 MRPL17Q9NRX2 175 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 TOPORSQ9NS56 1045 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 KBTBD4Q9NVX7 518 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
RABGGTA-211ENST00000559850 PPP1R37O75864 691 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 GAP43P17677 238 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 RPL17P18621 184 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 KRT85P78386 507 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 COASYQ13057 564 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 SMAD4Q13485 552 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 RTP2Q5QGT7 225 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 FAM171A1Q5VUB5 890 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 KIAA0319Q5VV43 1072 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 KIAA1841Q6NSI8 718 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 SYCE2Q6PIF2 218 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 CD300LGQ6UXG3 332 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 CEP57Q86XR8 500 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 IQUBQ8NA54 791 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 SLC22A17Q8WUG5 538 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 RIN2Q8WYP3 895 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 KCNN1Q92952 543 aa16.2■□□□□ 0.18
RABGGTA-211ENST00000559850 MSTO1Q9BUK6 570 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms