RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 SP140Q13342 867 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 FAM50AQ14320 339 aaKnown RBP5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 CLUL1Q15846 466 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 SMN1Q16637 294 aaKnown RBP5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 ABCB5Q2M3G0 1257 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 GJC2Q5T442 439 aaPredicted RBP5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 GDF7Q7Z4P5 450 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 FAXDC2Q96IV6 333 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 SLC46A2Q9BY10 475 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 POGKQ9P215 609 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 TUBD1Q9UJT1 453 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 FZD1Q9UP38 647 aa5.58□□□□□ -1.52
CTDSPL2-207ENST00000559738 DRGXA6NNA5 263 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 NCR1O76036 304 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 AMY1AP04745 511 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 SNRPA1P09661 255 aaKnown RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 RBP3P10745 1247 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 PCSK1P29120 753 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 CHN2P52757 468 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 PURAQ00577 322 aaKnown RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 ITKQ08881 620 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 PDCD4Q53EL6 469 aaKnown RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 FAM102AQ5T9C2 384 aaPredicted RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 ULK2Q8IYT8 1036 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 RPUSD2Q8IZ73 545 aaKnown RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 ZFP28Q8NHY6 868 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 NRG4Q8WWG1 115 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 FAM193BQ96PV7 902 aaPredicted RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 DCLRE1CQ96SD1 692 aaKnown RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 PRRX2Q99811 253 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 TTPALQ9BTX7 342 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 MRI1Q9BV20 369 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 SENP6Q9GZR1 1112 aaPredicted RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 LANCL2Q9NS86 450 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 AJAP1Q9UKB5 411 aaPredicted RBP5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 HS3ST4Q9Y661 456 aa5.57□□□□□ -1.52
CTDSPL2-207ENST00000559738 RAMP2O60895 175 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 NDUFS2O75306 463 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 ENDOD1O94919 500 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 ITGB1P05556 798 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 RAP2AP10114 183 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 MYBL2P10244 700 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 IL2RBP14784 551 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 C5AR1P21730 350 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 MGAT1P26572 445 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 RAP2BP61225 183 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 PCBP2Q15366 365 aaKnown RBP eCLIP5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 ATXN7L2Q5T6C5 722 aaPredicted RBP5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 LRRC55Q6ZSA7 311 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 SYNE4Q8N205 404 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 ZGPATQ8N5A5 531 aaKnown RBP5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 MTMR8Q96EF0 704 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 MYOCQ99972 504 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 PCDH12Q9NPG4 1184 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 AKIP1Q9NQ31 210 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 MKS1Q9NXB0 559 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 SLC23A1Q9UHI7 598 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 COL4A3BPQ9Y5P4 624 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 DMRT1Q9Y5R6 373 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 ACTL7AQ9Y615 435 aa5.56□□□□□ -1.52
CTDSPL2-207ENST00000559738 WASHC2CQ9Y4E1 1318 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 CENPVL1A0A0U1RR11 272 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 FAM171A2A8MVW0 826 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 LPXNO60711 386 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 WASP42768 502 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 FSTL1Q12841 308 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 ACAP2Q15057 778 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 RRP12Q5JTH9 1297 aaKnown RBP5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 PCSK4Q6UW60 755 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 PROKR1Q8TCW9 393 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 CCHCR1Q8TD31 782 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 CASKIN2Q8WXE0 1202 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 SSH1Q8WYL5 1049 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 MYEOVQ96EZ4 313 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 MOCS1Q9NZB8 636 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 DKK2Q9UBU2 259 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 INTUQ9ULD6 942 aa5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 USP15Q9Y4E8 981 aaPredicted RBP5.55□□□□□ -1.52
CTDSPL2-207ENST00000559738 KLHL33A6NCF5 533 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 TMEM191CA6NGB0 347 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 DIRC3C9JPN6 131 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 RNASET2O00584 256 aaKnown RBP5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 ABHD16AO95870 558 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 LAG3P18627 525 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 ATP5JP18859 108 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 ATP8B2P98198 1209 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 KRTAP1-1Q07627 177 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 MTM1Q13496 603 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 BEAN1Q3B7T3 259 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 TIGD2Q4W5G0 525 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 AGAP9Q5VTM2 703 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 MED25Q71SY5 747 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 VRK3Q8IV63 474 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 CYFIP2Q96F07 1278 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 PHACTR3Q96KR7 559 aa5.54□□□□□ -1.52
CTDSPL2-207ENST00000559738 TMEM140Q9NV12 185 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms