RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 NACC1Q96RE7 527 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 TTPALQ9BTX7 342 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 TBC1D17Q9HA65 648 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 SLC2A4RGQ9NR83 387 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 CACNA1BQ00975 2339 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 CASTOR2A6NHX0 329 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 EDN1P05305 212 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 PRKCBP05771 671 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 THP07101 528 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 HNRNPA1P09651 372 aaKnown RBP eCLIP14.46□□□□□ -0.09
TPM1-220ENST00000559556 RPA1P27694 616 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 HOXA9P31269 272 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 MCM7P33993 719 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 NAMPTP43490 491 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 ST3GAL1Q11201 340 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 PRPF4BQ13523 1007 aaKnown RBP14.46□□□□□ -0.09
TPM1-220ENST00000559556 MAPK6Q16659 721 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 FAM171A1Q5VUB5 890 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 PHLDB3Q6NSJ2 640 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 MAEAQ7L5Y9 396 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 GPR152Q8TDT2 470 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 CLSTN3Q9BQT9 956 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 ADPGKQ9BRR6 497 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 ARHGEF3Q9NR81 526 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 SNTG2Q9NY99 539 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
TPM1-220ENST00000559556 CA14Q9ULX7 337 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 EPG5Q9HCE0 2579 aa14.46□□□□□ -0.09
TPM1-220ENST00000559556 CNOT1A5YKK6 2376 aaKnown RBP14.46□□□□□ -0.1
TPM1-220ENST00000559556 EML5Q05BV3 1969 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 TMEM189-UBE2V1I3L0A0 370 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 ACKR2O00590 384 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 CYP11B2P19099 503 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 MUTP22033 750 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 RBM25P49756 843 aaKnown RBP14.45□□□□□ -0.1
TPM1-220ENST00000559556 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
TPM1-220ENST00000559556 PPP2R5AQ15172 486 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 LIN9Q5TKA1 542 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 PDXDC1Q6P996 788 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 PADI6Q6TGC4 694 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 ERMNQ8TAM6 284 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 LNX1Q8TBB1 728 aaPredicted RBP14.45□□□□□ -0.1
TPM1-220ENST00000559556 CXCL16Q9H2A7 254 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 NUMBLQ9Y6R0 609 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 MYO16Q9Y6X6 1858 aa14.45□□□□□ -0.1
TPM1-220ENST00000559556 C8AP07357 584 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 POU2F2P09086 479 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 OR52Z1P0C646 297 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 RFX1P22670 979 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 FSHRP23945 695 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 NEK4P51957 841 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 FOXK2Q01167 660 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 SAFBQ15424 915 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM1-220ENST00000559556 DCAF4L1Q3SXM0 396 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 EEF1DP3Q658K8 133 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.44□□□□□ -0.1
TPM1-220ENST00000559556 GRASPQ7Z6J2 395 aaPredicted RBP14.44□□□□□ -0.1
TPM1-220ENST00000559556 NOSTRINQ8IVI9 506 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 ADSSL1Q8N142 457 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 FGF14Q92915 247 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 DLGAP2Q9P1A6 1054 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 ACACBO00763 2458 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 GREB1Q4ZG55 1949 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 ANAPC1Q9H1A4 1944 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 LAMA1P25391 3075 aa14.44□□□□□ -0.1
TPM1-220ENST00000559556 CHD8Q9HCK8 2581 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 ARHGEF35A5YM69 484 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 STK25O00506 426 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 ADAM12O43184 909 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 EFNA5P52803 228 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 GUCY1B3Q02153 619 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 HAUS3Q68CZ6 603 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 MTSS1LQ765P7 747 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 CEP57Q86XR8 500 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 PJA1Q8NG27 643 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 PPP1R10Q96QC0 940 aaKnown RBP14.43□□□□□ -0.1
TPM1-220ENST00000559556 SEMA4AQ9H3S1 761 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 CDH7Q9ULB5 785 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 USP20Q9Y2K6 914 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 KIAA1549LQ6ZVL6 1849 aa14.43□□□□□ -0.1
TPM1-220ENST00000559556 HELZP42694 1942 aaKnown RBP14.43□□□□□ -0.1
TPM1-220ENST00000559556 SDK1Q7Z5N4 2213 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 XYLBO75191 536 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 FGFR3P22607 806 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 NTHL1P78549 312 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 RAB33AQ14088 237 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 UVSSAQ2YD98 709 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 DCLRE1AQ6PJP8 1040 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 PARM1Q6UWI2 310 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 RTL10Q7L3V2 364 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 DEPTORQ8TB45 409 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 SLC7A14Q8TBB6 771 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 KIFAP3Q92845 792 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 FGF13Q92913 245 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 IFT74Q96LB3 600 aa14.42□□□□□ -0.1
TPM1-220ENST00000559556 FOXP1Q9H334 677 aaPredicted RBP14.42□□□□□ -0.1
TPM1-220ENST00000559556 MTRRQ9UBK8 725 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms