RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CASS4Q9NQ75 786 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TLR9Q9NR96 1032 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 LANCL2Q9NS86 450 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TMEM140Q9NV12 185 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PIH1D1Q9NWS0 290 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SIRT5Q9NXA8 310 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 TERF2IPQ9NYB0 399 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 HSPBP1Q9NZL4 362 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 CPNE7Q9UBL6 633 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 Q9UFV3 132 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 AFF4Q9UHB7 1163 aaKnown RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 SCOCQ9UIL1 159 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 AJAP1Q9UKB5 411 aaPredicted RBP2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PADI4Q9UM07 663 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 PCDHGB3Q9Y5G1 929 aa2.76□□□□□ -1.97
GABPB1-209ENST00000559100 USP19O94966 1318 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 A0A1W2PR48 441 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 KIAA1324LA8MWY0 1029 aaPredicted RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 FFAR2O15552 330 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 TMEM127O75204 238 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 GPR32O75388 356 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 CYP7B1O75881 506 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 ALDH1A2O94788 518 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 IL18BPO95998 194 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 HMGCRP04035 888 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 CENPBP07199 599 aaPredicted RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 PFKLP17858 780 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 DDCP20711 480 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 MALP21145 153 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 VIPR1P32241 457 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 THBS2P35442 1172 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 IL6STP40189 918 aaPredicted RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SARSP49591 514 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 NKX6-1P78426 367 aaPredicted RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SRSF3P84103 164 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 FMO1Q01740 532 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 TARDBPQ13148 414 aaKnown RBP eCLIP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SMAD4Q13485 552 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 DAG1Q14118 895 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 PUM3Q15397 648 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 STILQ15468 1287 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 MST1LQ2TV78 715 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 TUBB8Q3ZCM7 444 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SLC44A4Q53GD3 710 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 PRR16Q569H4 304 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 C3orf38Q5JPI3 329 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 HIBCHQ6NVY1 386 aaPredicted RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 TRMT10BQ6PF06 316 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 FBXO38Q6PIJ6 1188 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 LDHAL6AQ6ZMR3 332 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 MMS22LQ6ZRQ5 1243 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SYDE1Q6ZW31 735 aaPredicted RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SAPCD2Q86UD0 394 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 TICAM2Q86XR7 235 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 WFDC3Q8IUB2 231 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 MPP5Q8N3R9 675 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 NKAPQ8N5F7 415 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 OR6B3Q8NGW1 331 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SNX33Q8WV41 574 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 CPA5Q8WXQ8 436 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 GFM2Q969S9 779 aaKnown RBP2.75□□□□□ -1.97
GABPB1-209ENST00000559100 MUL1Q969V5 352 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 ZNF566Q969W8 418 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 ARL8AQ96BM9 186 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 IQCDQ96DY2 449 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SAMD11Q96NU1 681 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 PTPN18Q99952 460 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SYT3Q9BQG1 590 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 OSBPL6Q9BZF3 934 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 EPC1Q9H2F5 836 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 WDCPQ9H6R7 721 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 BCO1Q9HAY6 547 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 ATP6V0A4Q9HBG4 840 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 PCDH18Q9HCL0 1135 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 LRFN1Q9P244 771 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 NCDNQ9UBB6 729 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 SRRDQ9UH36 339 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 FBXO10Q9UK96 956 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 PLA2G2DQ9UNK4 145 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 WASF3Q9UPY6 502 aa2.75□□□□□ -1.97
GABPB1-209ENST00000559100 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.75□□□□□ -1.973e-6■■■■□ 21.7
GABPB1-209ENST00000559100 OVOL3O00110 214 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 MYO1CO00159 1063 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 ADCY6O43306 1168 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 THAP12O43422 761 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 TBC1D4O60343 1298 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 TLR5O60602 858 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 ADAMTS4O75173 837 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 SKAP2O75563 359 aaPredicted RBP2.74□□□□□ -1.97
GABPB1-209ENST00000559100 ITGA10O75578 1167 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 AHSGP02765 367 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 CD1AP06126 327 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 GNAI3P08754 354 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 FTH1P19P0C7X4 201 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 RAP2AP10114 183 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 GAAP10253 952 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 NPR1P16066 1061 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 TSHRP16473 764 aa2.74□□□□□ -1.97
GABPB1-209ENST00000559100 PHKA1P46020 1223 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms