RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PDIA5Q14554 519 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 RABEP1Q15276 862 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 TMEM132AQ24JP5 1023 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 FAM171A1Q5VUB5 890 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 SMG7Q92540 1137 aaKnown RBP14.92□□□□□ -0.02
VPS18-203ENST00000558855 ZBTB45Q96K62 511 aaPredicted RBP14.92□□□□□ -0.02
VPS18-203ENST00000558855 ACO2Q99798 780 aaKnown RBP14.92□□□□□ -0.02
VPS18-203ENST00000558855 TARS2Q9BW92 718 aaKnown RBP14.92□□□□□ -0.02
VPS18-203ENST00000558855 NT5C3AQ9H0P0 336 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 KCNK12Q9HB15 430 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 WDR6Q9NNW5 1121 aaKnown RBP14.92□□□□□ -0.02
VPS18-203ENST00000558855 FNIP2Q9P278 1114 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 ARHGAP28Q9P2N2 729 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 SF3B1O75533 1304 aaKnown RBP eCLIP14.92□□□□□ -0.02
VPS18-203ENST00000558855 PHLPP2Q6ZVD8 1323 aa14.92□□□□□ -0.02
VPS18-203ENST00000558855 NPHP3-ACAD11A0A0J9YXS1 232 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 PI15O43692 258 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
VPS18-203ENST00000558855 TADA2AO75478 443 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 THP07101 528 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 PRPHP41219 470 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 BRCC3P46736 316 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 CLCNKBP51801 687 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 OSTNP61366 133 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
VPS18-203ENST00000558855 GRIN1Q05586 938 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 PPP2R5AQ15172 486 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 PSMD5Q16401 504 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 SEZ6Q53EL9 994 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 POTEHQ6S545 545 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 CEP57Q86XR8 500 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 UBALD2Q8IYN6 164 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 PIK3R5Q8WYR1 880 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 KIFAP3Q92845 792 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 HAPLN2Q9GZV7 340 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 FBXW11Q9UKB1 542 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 TNFSF13BQ9Y275 285 aa14.91□□□□□ -0.02
VPS18-203ENST00000558855 CCDC169A6NNP5 214 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 NRG2O14511 850 aaPredicted RBP14.9□□□□□ -0.02
VPS18-203ENST00000558855 SLC16A4O15374 487 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 PROZP22891 400 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 TKTP29401 623 aaKnown RBP14.9□□□□□ -0.02
VPS18-203ENST00000558855 DCAF4L1Q3SXM0 396 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 HYIQ5T013 277 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 ALKAL1Q6UXT8 129 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 OTOP3Q7RTS5 596 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 IFT74Q96LB3 600 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 ADPGKQ9BRR6 497 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 SSX2IPQ9Y2D8 614 aa14.9□□□□□ -0.02
VPS18-203ENST00000558855 SMIM28A0A1B0GU29 152 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 H0Y858 1186 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 K7ERI5 159 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 NR1I2O75469 434 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 ZMYND10O75800 440 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 FGFR3P22607 806 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 GBP2P32456 591 aaPredicted RBP14.89□□□□□ -0.03
VPS18-203ENST00000558855 GRM5P41594 1212 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 EFNA5P52803 228 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 ZRSR1Q15695 479 aaKnown RBP14.89□□□□□ -0.03
VPS18-203ENST00000558855 ZNF568Q3ZCX4 644 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 TMEM119Q4V9L6 283 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 ARSHQ5FYA8 562 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 XKR4Q5GH76 650 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 DTHD1Q6ZMT9 781 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 GET4Q7L5D6 327 aaPredicted RBP14.89□□□□□ -0.03
VPS18-203ENST00000558855 C18orf25Q96B23 403 aaPredicted RBP14.89□□□□□ -0.03
VPS18-203ENST00000558855 DDX27Q96GQ7 796 aaKnown RBP14.89□□□□□ -0.03
VPS18-203ENST00000558855 SNX27Q96L92 541 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 TTPALQ9BTX7 342 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 RPP25Q9BUL9 199 aaKnown RBP14.89□□□□□ -0.03
VPS18-203ENST00000558855 RHOBTB2Q9BYZ6 727 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 PRKD2Q9BZL6 878 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.89□□□□□ -0.03
VPS18-203ENST00000558855 HCFC1R1Q9NWW0 138 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 DUSP12Q9UNI6 340 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 COL4A2P08572 1712 aa14.89□□□□□ -0.03
VPS18-203ENST00000558855 MIA3Q5JRA6 1907 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 CACNA1HO95180 2353 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 PATJQ8NI35 1801 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 KRBA1A5PL33 1030 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 VWA3AA6NCI4 1184 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 TMEM189-UBE2V1I3L0A0 370 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 HARSP12081 509 aaKnown RBP14.88□□□□□ -0.03
VPS18-203ENST00000558855 PTPN5P54829 565 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 SLC12A3P55017 1021 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 TDGQ13569 410 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 UPP1Q16831 310 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 KRT79Q5XKE5 535 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 GRASPQ7Z6J2 395 aaPredicted RBP14.88□□□□□ -0.03
VPS18-203ENST00000558855 GPR65Q8IYL9 337 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 HDAC7Q8WUI4 952 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
VPS18-203ENST00000558855 PLEKHA4Q9H4M7 779 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 TMEM134Q9H6X4 195 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 KMT5AQ9NQR1 393 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 ZDHHC7Q9NXF8 308 aa14.88□□□□□ -0.03
VPS18-203ENST00000558855 EPS15L1Q9UBC2 864 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms