RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
HMBOX1-212ENST00000558662 USP17L12C9JPN9 530 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 USP17L21D6R901 530 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 KRT36O76013 467 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 TGDSO95455 350 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 CBX6O95503 412 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 USP46P62068 366 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 NFIL3Q16649 462 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 TBCKQ8TEA7 893 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 CFAP57Q96MR6 1250 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 PAIP2BQ9ULR5 123 aaKnown RBP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 ZNF148Q9UQR1 794 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 SMCO2A6NFE2 343 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 EXOC3O60645 756 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 TNFAIP3P21580 790 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 SCNN1BP51168 640 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 INHBCP55103 352 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 IRX4P78413 519 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 CYLC2Q14093 348 aaPredicted RBP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 DSTYKQ6XUX3 929 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 ZBTB8BQ8NAP8 495 aaPredicted RBP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 OLIG1Q8TAK6 271 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 HAUS1Q96CS2 278 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 OSBPL8Q9BZF1 889 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 NINJ2Q9NZG7 142 aa17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 DDX25Q9UHL0 483 aaKnown RBP17.23■□□□□ 0.35
HMBOX1-212ENST00000558662 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 IL1BP01584 269 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 HPCAP84074 193 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 ASPHQ12797 758 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 DNAJC3Q13217 504 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 PTPROQ16827 1216 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 KNOP1Q1ED39 458 aaKnown RBP17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 MAST2Q6P0Q8 1798 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 ZNF554Q86TJ5 538 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 SMYD1Q8NB12 490 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 FNBP1Q96RU3 617 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 NDE1Q9NXR1 346 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 STK24Q9Y6E0 443 aa17.22■□□□□ 0.35
HMBOX1-212ENST00000558662 FSCN2O14926 492 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 CIB2O75838 187 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 CYP1A1P04798 512 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 KIF22Q14807 665 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 SIX1Q15475 284 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 TMCO4Q5TGY1 634 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 ADAT2Q7Z6V5 191 aaKnown RBP17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 ADGRA1Q86SQ6 560 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 CD101Q93033 1021 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 PHACTR1Q9C0D0 580 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 OCEL1Q9H607 264 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 MKNK2Q9HBH9 465 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 MLXIPLQ9NP71 852 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 PLK2Q9NYY3 685 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 FETUBQ9UGM5 382 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 ZNF232Q9UNY5 417 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 SH3GLB1Q9Y371 365 aa17.21■□□□□ 0.35
HMBOX1-212ENST00000558662 COPB2P35606 906 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 ACADVLP49748 655 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 PHEXP78562 749 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 KRT17Q04695 432 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 CTTNQ14247 550 aaKnown RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 HERC4Q5GLZ8 1057 aaPredicted RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 UBAP2Q5T6F2 1119 aaKnown RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 RFWD3Q6PCD5 774 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 B3GNT6Q6ZMB0 384 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 RNF207Q6ZRF8 634 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 GLYCTKQ8IVS8 523 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 PDCD7Q8N8D1 485 aaKnown RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 DIS3LQ8TF46 1054 aaKnown RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TUBGCP5Q96RT8 1024 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 MKNK1Q9BUB5 465 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 THEGQ9P2T0 379 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 SPATA31A1Q5TZJ5 1347 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 FAM196BA6NMK8 535 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 UBTFL6P0CB48 400 aaPredicted RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 ANPEPP15144 967 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 GPC5P78333 572 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TBCCQ15814 346 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 WDR60Q8WVS4 1066 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TRIM55Q9BYV6 548 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 ABCF2Q9UG63 623 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 ASIC3Q9UHC3 531 aa17.2■□□□□ 0.34
HMBOX1-212ENST00000558662 TRMT112Q9UI30 125 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms