RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 NYAP1Q6ZVC0 841 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 TMEM192Q8IY95 271 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 GUF1Q8N442 669 aaKnown RBP11.34□□□□□ -0.59
PSMA4-207ENST00000558635 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 CASD1Q96PB1 797 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 GTPBP4Q9BZE4 634 aaKnown RBP11.34□□□□□ -0.59
PSMA4-207ENST00000558635 TMEM117Q9H0C3 514 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 PCIF1Q9H4Z3 704 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 RSAD1Q9HA92 442 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 RC3H2Q9HBD1 1191 aaKnown RBP11.34□□□□□ -0.59
PSMA4-207ENST00000558635 UBN1Q9NPG3 1134 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 KLK14Q9P0G3 267 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 MSRAQ9UJ68 235 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
PSMA4-207ENST00000558635 INPP5FQ9Y2H2 1132 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 GIT1Q9Y2X7 761 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
PSMA4-207ENST00000558635 ARL5CA6NH57 179 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
PSMA4-207ENST00000558635 CLIC2O15247 247 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 OGTO15294 1046 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 FAM189A1O60320 539 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 RECQL4O94761 1208 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 CA3P07451 260 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 CLTAP09496 248 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 BMP6P22004 513 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 GARTP22102 1010 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 PRCPP42785 496 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 AFF1P51825 1210 aaKnown RBP11.33□□□□□ -0.6
PSMA4-207ENST00000558635 BTG3Q14201 252 aaPredicted RBP11.33□□□□□ -0.6
PSMA4-207ENST00000558635 RAB30Q15771 203 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 NOMO2Q5JPE7 1267 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
PSMA4-207ENST00000558635 ZBTB41Q5SVQ8 909 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 HS2ST1Q7LGA3 356 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 ABI1Q8IZP0 508 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 ZSWIM2Q8NEG5 633 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 ZFP42Q96MM3 310 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 ACAP3Q96P50 834 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 GAD1Q99259 594 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 CBWD1Q9BRT8 395 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 CCDC94Q9BW85 323 aaPredicted RBP11.33□□□□□ -0.6
PSMA4-207ENST00000558635 CXCL16Q9H2A7 254 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 NKX2-4Q9H2Z4 354 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 AGPAT3Q9NRZ7 376 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 TSR3Q9UJK0 312 aaKnown RBP11.33□□□□□ -0.6
PSMA4-207ENST00000558635 PTPRSQ13332 1948 aa11.33□□□□□ -0.6
PSMA4-207ENST00000558635 GOLGA8IPA6NC78 632 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 GOLGA8JA6NMD2 632 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 PDXKO00764 312 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 ARHGEF15O94989 841 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 DNAJB2P25686 324 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 MLH1P40692 756 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 TNFSF9P41273 254 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 ACOT2P49753 483 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 SCNN1GP51170 649 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 YARSP54577 528 aaKnown RBP11.32□□□□□ -0.6
PSMA4-207ENST00000558635 SNRPFP62306 86 aaKnown RBP11.32□□□□□ -0.6
PSMA4-207ENST00000558635 KYAT1Q16773 422 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 CCDC183Q5T5S1 534 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 LRRC55Q6ZSA7 311 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
PSMA4-207ENST00000558635 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 FIBCD1Q8N539 461 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 TRIML1Q8N9V2 468 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 TYW1Q9NV66 732 aaKnown RBP11.32□□□□□ -0.6
PSMA4-207ENST00000558635 MIOSQ9NXC5 875 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 HSPBP1Q9NZL4 362 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
PSMA4-207ENST00000558635 CGNQ9P2M7 1197 aaKnown RBP11.32□□□□□ -0.6
PSMA4-207ENST00000558635 MRPL42Q9Y6G3 142 aaKnown RBP11.32□□□□□ -0.6
PSMA4-207ENST00000558635 COL4A6Q14031 1691 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 LINC01553A4QN01 128 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 INPPL1O15357 1258 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 MEFVO15553 781 aaPredicted RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 POMCP01189 267 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 CXCL8P10145 99 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 CYP2J2P51589 502 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 STIM1Q13586 685 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 NFKBIBQ15653 356 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 ENOX2Q16206 610 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 CRELD2Q6UXH1 353 aaPredicted RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 ALKAL1Q6UXT8 129 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 RBM43Q6ZSC3 357 aaKnown RBP11.31□□□□□ -0.6
PSMA4-207ENST00000558635 SPRED2Q7Z698 418 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 C12orf56Q8IXR9 622 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 TTC13Q8NBP0 860 aa11.31□□□□□ -0.6
PSMA4-207ENST00000558635 GSTCDQ8NEC7 633 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms