RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 HOXA7P31268 230 aaPredicted RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 ARL4AP40617 200 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 FLT3LGP49771 235 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 TFAP4Q01664 338 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 PRKCZQ05513 592 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 PPARAQ07869 468 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 CBX2Q14781 532 aaPredicted RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 CCL14Q16627 93 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 MLANAQ16655 118 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 MCMDC2Q4G0Z9 681 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 TTC22Q5TAA0 569 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 ZSCAN25Q6NSZ9 544 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 FBXO46Q6PJ61 603 aaPredicted RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 FASTKD5Q7L8L6 764 aaKnown RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 CHAMP1Q96JM3 812 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 PAGR1Q9BTK6 254 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 SLC6A17Q9H1V8 727 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 CPVLQ9H3G5 476 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 NSUN3Q9H649 340 aaKnown RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 RPAP3Q9H6T3 665 aaPredicted RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 TNFRSF12AQ9NP84 129 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.02□□□□□ -1.61
SPG11-211ENST00000558561 PPARGC1AQ9UBK2 798 aaKnown RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.02□□□□□ -1.61
SPG11-211ENST00000558561 DDX49Q9Y6V7 483 aaKnown RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 CENPFP49454 3210 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 COL11A1P12107 1806 aaPredicted RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 COL2A1P02458 1487 aaPredicted RBP5.01□□□□□ -1.61
SPG11-211ENST00000558561 BAZ2BQ9UIF8 2168 aaKnown RBP5.01□□□□□ -1.61
SPG11-211ENST00000558561 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 TLDC2A0PJX2 215 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 LRRC10BA6NIK2 292 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 NUDT19A8MXV4 375 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 C19orf81C9J6K1 198 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 MPOP05164 745 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 ZFYP08048 801 aaPredicted RBP5.01□□□□□ -1.61
SPG11-211ENST00000558561 VCAM1P19320 739 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 CYP2B6P20813 491 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 CHMLP26374 656 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 TDO2P48775 406 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 ERVFRD-1P60508 538 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 HERVK_113P62684 666 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 LSAMPQ13449 338 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 RRP12Q5JTH9 1297 aaKnown RBP5.01□□□□□ -1.61
SPG11-211ENST00000558561 PRAMEF19Q5SWL8 479 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 FAM83BQ5T0W9 1011 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 RSPO2Q6UXX9 243 aaPredicted RBP5.01□□□□□ -1.61
SPG11-211ENST00000558561 LBX2Q6XYB7 198 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 TBC1D10CQ8IV04 446 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 SLC7A14Q8TBB6 771 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 PTPRN2Q92932 1015 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 CEP95Q96GE4 821 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 ERO1AQ96HE7 468 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 GPATCH3Q96I76 525 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 KIAA1683Q9H0B3 1180 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 AS3MTQ9HBK9 375 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 CABP5Q9NP86 173 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 HELLSQ9NRZ9 838 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 FANCLQ9NW38 375 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 TMEM260Q9NX78 707 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 CLDND1Q9NY35 253 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 FLRT1Q9NZU1 646 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 KLHL14Q9P2G3 628 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 SRRDQ9UH36 339 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 TMX2Q9Y320 296 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 RIPK3Q9Y572 518 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 HCFC2Q9Y5Z7 792 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 GREB1LQ9C091 1923 aaPredicted RBP5.01□□□□□ -1.61
SPG11-211ENST00000558561 LOC285556D6RIA3 1793 aa5.01□□□□□ -1.61
SPG11-211ENST00000558561 PARP14Q460N5 1801 aa5□□□□□ -1.61
SPG11-211ENST00000558561 CCDC163A0A0D9SF12 145 aa5□□□□□ -1.61
SPG11-211ENST00000558561 ZC3H12DA2A288 527 aaKnown RBP5□□□□□ -1.61
SPG11-211ENST00000558561 OR14I1A6ND48 311 aa5□□□□□ -1.61
SPG11-211ENST00000558561 F5H6K3 240 aa5□□□□□ -1.61
SPG11-211ENST00000558561 NDUFB10O96000 172 aa5□□□□□ -1.61
SPG11-211ENST00000558561 NTRK1P04629 796 aa5□□□□□ -1.61
SPG11-211ENST00000558561 DBHP09172 617 aa5□□□□□ -1.61
SPG11-211ENST00000558561 GLI4P10075 376 aa5□□□□□ -1.61
SPG11-211ENST00000558561 PTGS1P23219 599 aa5□□□□□ -1.61
SPG11-211ENST00000558561 MCCP23508 829 aa5□□□□□ -1.61
SPG11-211ENST00000558561 RGS19P49795 217 aa5□□□□□ -1.61
SPG11-211ENST00000558561 GPR85P60893 370 aa5□□□□□ -1.61
SPG11-211ENST00000558561 GABREP78334 506 aa5□□□□□ -1.61
SPG11-211ENST00000558561 KLRC3Q07444 240 aa5□□□□□ -1.61
SPG11-211ENST00000558561 TMEM132BQ14DG7 1078 aa5□□□□□ -1.61
SPG11-211ENST00000558561 ALX1Q15699 326 aa5□□□□□ -1.61
SPG11-211ENST00000558561 C21orf62-AS1Q17RA5 79 aa5□□□□□ -1.61
SPG11-211ENST00000558561 RPTNQ6XPR3 784 aa5□□□□□ -1.61
SPG11-211ENST00000558561 STOX1Q6ZVD7 989 aa5□□□□□ -1.61
SPG11-211ENST00000558561 CYB5R4Q7L1T6 521 aa5□□□□□ -1.61
SPG11-211ENST00000558561 CHST3Q7LGC8 479 aa5□□□□□ -1.61
SPG11-211ENST00000558561 ZNF605Q86T29 641 aa5□□□□□ -1.61
SPG11-211ENST00000558561 IRF2BP1Q8IU81 584 aa5□□□□□ -1.61
SPG11-211ENST00000558561 ZNF444Q8N0Y2 327 aaPredicted RBP5□□□□□ -1.61
SPG11-211ENST00000558561 USP6NLQ92738 828 aa5□□□□□ -1.61
SPG11-211ENST00000558561 TRMT2BQ96GJ1 504 aaKnown RBP5□□□□□ -1.61
SPG11-211ENST00000558561 TMEM169Q96HH4 297 aa5□□□□□ -1.61
SPG11-211ENST00000558561 C12orf42Q96LP6 360 aa5□□□□□ -1.61
SPG11-211ENST00000558561 CLUHP3Q96NS8 147 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms