RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 EXOC7Q9UPT5 735 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 GDAQ9Y2T3 454 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 ZDHHC9Q9Y397 364 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 ZDBF2Q9HCK1 2354 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 ARID2Q68CP9 1835 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 PRR33A8MZF0 331 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 K7ENM7 598 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 HNRNPDLO14979 420 aaKnown RBP9.27□□□□□ -0.93
TPM1-213ENST00000558400 POLR2DO15514 142 aaKnown RBP9.27□□□□□ -0.93
TPM1-213ENST00000558400 MAP3K13O43283 966 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 TADA2AO75478 443 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 PIGRP01833 764 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 CLTAP09496 248 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 IDEP14735 1019 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 KCNA5P22460 613 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 IRS1P35568 1242 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 PBX3P40426 434 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 MATR3P43243 847 aaKnown RBP eCLIP9.27□□□□□ -0.93
TPM1-213ENST00000558400 NRIP1P48552 1158 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 NUBP1P53384 320 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 ELAVL2Q12926 359 aaKnown RBP9.27□□□□□ -0.93
TPM1-213ENST00000558400 NOLC1Q14978 699 aaKnown RBP eCLIP9.27□□□□□ -0.93
TPM1-213ENST00000558400 E2F4Q16254 413 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 XKR4Q5GH76 650 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 RESP18Q5W5W9 173 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 KIAA1841Q6NSI8 718 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 CNNM4Q6P4Q7 775 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 DCLRE1AQ6PJP8 1040 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 ALKAL1Q6UXT8 129 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 TMEM184AQ6ZMB5 413 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 EP400NLQ6ZTU2 488 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 RBM23Q86U06 439 aaKnown RBP9.27□□□□□ -0.93
TPM1-213ENST00000558400 PPFIBP1Q86W92 1011 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 UROC1Q96N76 676 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 EMILIN2Q9BXX0 1053 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 CDT1Q9H211 546 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 TMEM206Q9H813 350 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 MRPL17Q9NRX2 175 aaKnown RBP9.27□□□□□ -0.93
TPM1-213ENST00000558400 PANK4Q9NVE7 773 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 USP20Q9Y2K6 914 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 RALGAPA2Q2PPJ7 1873 aa9.27□□□□□ -0.93
TPM1-213ENST00000558400 FNDC1Q4ZHG4 1894 aaPredicted RBP9.27□□□□□ -0.93
TPM1-213ENST00000558400 COL4A4P53420 1690 aaPredicted RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 A0A087X0B3 334 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 SMIM28A0A1B0GU29 152 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 PVALEFA0A1B0GWK0 134 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 C2orf71A6NGG8 1288 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 ABLIM1O14639 778 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 OGTO15294 1046 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 XPOTO43592 962 aaKnown RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 TRAPPC3O43617 180 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 C1RP00736 705 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 SOD2P04179 222 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 EDN1P05305 212 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 MYL1P05976 194 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 KCNE1P15382 129 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 HOXB8P17481 243 aaPredicted RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 NMT1P30419 496 aaKnown RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 RPL9P32969 192 aaKnown RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 NDUFV1P49821 464 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 HSP90AA2PQ14568 343 aaPredicted RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 DUSP6Q16828 381 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 USP41Q3LFD5 358 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 PLPP4Q5VZY2 271 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 ELMSAN1Q6PJG2 1045 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 SFR1Q86XK3 245 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 MAP4K3Q8IVH8 894 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 CD302Q8IX05 232 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 CEP57L1Q8IYX8 460 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 LEO1Q8WVC0 666 aaPredicted RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 DHX58Q96C10 678 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 ZBTB45Q96K62 511 aaPredicted RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 ACCSQ96QU6 501 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 FIZ1Q96SL8 496 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 ZBP1Q9H171 429 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.26□□□□□ -0.93
TPM1-213ENST00000558400 ANKFY1Q9P2R3 1169 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 DPP7Q9UHL4 492 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 ADAM28Q9UKQ2 775 aa9.26□□□□□ -0.93
TPM1-213ENST00000558400 PRG3Q9Y2Y8 225 aaPredicted RBP9.26□□□□□ -0.93
TPM1-213ENST00000558400 MYO7AQ13402 2215 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 A0A0B4J269 797 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 A0A1W2PQ27 194 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 A0A1W2PQ64 194 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 A0A1W2PQD8 194 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 GOLGA6L4A6NEF3 574 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 PTGESO14684 152 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 PER2O15055 1255 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 KIAA0391O15091 583 aaKnown RBP9.25□□□□□ -0.93
TPM1-213ENST00000558400 GCNT3O95395 438 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 LDHAP00338 332 aaKnown RBP9.25□□□□□ -0.93
TPM1-213ENST00000558400 URODP06132 367 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 SLFN14P0C7P3 912 aa9.25□□□□□ -0.93
TPM1-213ENST00000558400 CA8P35219 290 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms