RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PSMD6Q15008 389 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 SURF1Q15526 300 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 UGCGQ16739 394 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 NBPF12Q5TAG4 269 aaPredicted RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 FAM160B1Q5W0V3 765 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 SYDE1Q6ZW31 735 aaPredicted RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 KLHL7Q8IXQ5 586 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 RPUSD2Q8IZ73 545 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 CASKIN2Q8WXE0 1202 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 POMGNT1Q8WZA1 660 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 FAM167AQ96KS9 214 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 WRNIP1Q96S55 665 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 PRR14Q9BWN1 585 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 THAP2Q9H0W7 228 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 PCIF1Q9H4Z3 704 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 AVENQ9NQS1 362 aaPredicted RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 C1orf112Q9NSG2 853 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 SEPT11Q9NVA2 429 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 PKD2L1Q9P0L9 805 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 CTTNBP2NLQ9P2B4 639 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 RGS17Q9UGC6 210 aaPredicted RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 NFU1Q9UMS0 254 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 PCDHB2Q9Y5E7 798 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 MAFBQ9Y5Q3 323 aaPredicted RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 ALG6Q9Y672 507 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 ERICH4A6NGS2 130 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 HNRNPDLO14979 420 aaKnown RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 ITGBL1O95965 494 aaPredicted RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 FGGP02679 453 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 CYP11B1P15538 503 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 TBXAS1P24557 533 aaPredicted RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 ADSSP30520 456 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 FNTAP49354 379 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 LIG4P49917 911 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 DLG4P78352 724 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 IRX3P78415 501 aaPredicted RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 PTP4A2Q12974 167 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 NEDD9Q14511 834 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 HLTFQ14527 1009 aaKnown RBP eCLIP8.93□□□□□ -0.98
SPG11-209ENST00000558253 TMEM132BQ14DG7 1078 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 AMHR2Q16671 573 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 SEL1L2Q5TEA6 688 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 ACAD10Q6JQN1 1059 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 C15orf39Q6ZRI6 1047 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 CEP128Q6ZU80 1094 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 MAEAQ7L5Y9 396 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 GPC2Q8N158 579 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 PPM1KQ8N3J5 372 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 C3orf20Q8ND61 904 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 HELQQ8TDG4 1101 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 SLC7A3Q8WY07 619 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 FAXDC2Q96IV6 333 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 RNPC3Q96LT9 517 aaKnown RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 ZSWIM1Q9BR11 485 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 JPH2Q9BR39 696 aaPredicted RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 CAPS2Q9BXY5 557 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 PORCNQ9H237 461 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 BCAS3Q9H6U6 928 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 POLD4Q9HCU8 107 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 PCYOX1Q9UHG3 505 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 PACSIN2Q9UNF0 486 aaPredicted RBP8.93□□□□□ -0.98
SPG11-209ENST00000558253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.93□□□□□ -0.98
SPG11-209ENST00000558253 AFG3L2Q9Y4W6 797 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 PCDHA3Q9Y5H8 950 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 FER1L6Q2WGJ9 1857 aa8.93□□□□□ -0.98
SPG11-209ENST00000558253 IGKV6D-21A0A0A0MT36 114 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ANKRD63C9JTQ0 380 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 TRIM66O15016 1216 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 PHF2O75151 1096 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 PHACTR2O75167 634 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 RGS20O76081 388 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 SLC25A27O95847 323 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 MYZAPP0CAP1 466 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ABCB4P21439 1286 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 CTNNA1P35221 906 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 ARL2P36404 184 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 USP8P40818 1118 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 POLGP54098 1239 aaPredicted RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 RWDD2BP57060 319 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ERVK-9P63128 1117 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 DR1Q01658 176 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 POU5F1Q01860 360 aaKnown RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 PRKCEQ02156 737 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 MAP2K1Q02750 393 aaPredicted RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 CYP1B1Q16678 543 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 TBC1D10BQ4KMP7 808 aaPredicted RBP8.92□□□□□ -0.98
SPG11-209ENST00000558253 AGBL2Q5U5Z8 902 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 PLA2G4FQ68DD2 849 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 ZPBP2Q6X784 338 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 LBX2Q6XYB7 198 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 KDM7AQ6ZMT4 941 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 B4GALNT4Q76KP1 1039 aa8.92□□□□□ -0.98
SPG11-209ENST00000558253 SV2AQ7L0J3 742 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms