RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 FGFR1P11362 822 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 ZSCAN20P17040 1043 aaPredicted RBP9.88□□□□□ -0.83
CHD8-214ENST00000557727 KCNJ6P48051 423 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
CHD8-214ENST00000557727 MCL1Q07820 350 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 ZBTB41Q5SVQ8 909 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 TWF2Q6IBS0 349 aaKnown RBP9.88□□□□□ -0.83
CHD8-214ENST00000557727 KANK3Q6NY19 840 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 TMEM192Q8IY95 271 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 SLC17A8Q8NDX2 589 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 ZSWIM2Q8NEG5 633 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 MTIF3Q9H2K0 278 aaKnown RBP9.88□□□□□ -0.83
CHD8-214ENST00000557727 CLSTN2Q9H4D0 955 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 SLC39A2Q9NP94 309 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 GDAQ9Y2T3 454 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 SCN1AP35498 2009 aa9.88□□□□□ -0.83
CHD8-214ENST00000557727 UBE4BO95155 1302 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 BRWD1Q9NSI6 2320 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 A0A0B4J269 797 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
CHD8-214ENST00000557727 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
CHD8-214ENST00000557727 N4BP3O15049 544 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 KINO60870 393 aaKnown RBP9.87□□□□□ -0.83
CHD8-214ENST00000557727 OFD1O75665 1012 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 UPP2O95045 317 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 NPTXRO95502 500 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 EOMESO95936 686 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 RAB27AP51159 221 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 ALCAMQ13740 583 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 HABP4Q5JVS0 413 aaKnown RBP9.87□□□□□ -0.83
CHD8-214ENST00000557727 FAM117BQ6P1L5 589 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 MPZL3Q6UWV2 235 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 CRELD2Q6UXH1 353 aaPredicted RBP9.87□□□□□ -0.83
CHD8-214ENST00000557727 LRRC55Q6ZSA7 311 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 RBM43Q6ZSC3 357 aaKnown RBP9.87□□□□□ -0.83
CHD8-214ENST00000557727 CASD1Q96PB1 797 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 KCTD10Q9H3F6 313 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 MAN1B1Q9UKM7 699 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 PCDHA11Q9Y5I1 949 aa9.87□□□□□ -0.83
CHD8-214ENST00000557727 PRRC2BQ5JSZ5 2229 aaKnown RBP9.86□□□□□ -0.83
CHD8-214ENST00000557727 REV3LO60673 3130 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 PTGESO14684 152 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 HNRNPDLO14979 420 aaKnown RBP9.86□□□□□ -0.83
CHD8-214ENST00000557727 ADRB2P07550 413 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 MCF2P10911 925 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 ABCD1P33897 745 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 GRM5P41594 1212 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 WNT7BP56706 349 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 STRN3Q13033 797 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 PSMD2Q13200 908 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 MORC3Q14149 939 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 NOLC1Q14978 699 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD8-214ENST00000557727 NAB2Q15742 525 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 CAMK4Q16566 473 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 ZNF568Q3ZCX4 644 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 ZCWPW2Q504Y3 356 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 COBLL1Q53SF7 1204 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 XKR4Q5GH76 650 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 ALKAL1Q6UXT8 129 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 GPIHBP1Q8IV16 184 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 SMYD4Q8IYR2 804 aaPredicted RBP9.86□□□□□ -0.83
CHD8-214ENST00000557727 CYP4X1Q8N118 509 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 TMEM174Q8WUU8 243 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 ACCSQ96QU6 501 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 RAD9AQ99638 391 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 CBWD1Q9BRT8 395 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 CWH43Q9H720 699 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 EXOC1Q9NV70 894 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 MIOSQ9NXC5 875 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 PLAGL2Q9UPG8 496 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 PCDHB7Q9Y5E2 793 aa9.86□□□□□ -0.83
CHD8-214ENST00000557727 TSC2P49815 1807 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 LINC01553A4QN01 128 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 ZBTB24O43167 697 aaPredicted RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 RECQL4O94761 1208 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 CA3P07451 260 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 SKIP12755 728 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 AKAP5P24588 427 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 TNFSF9P41273 254 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 LIG4P49917 911 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 FXR1P51114 621 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD8-214ENST00000557727 TAP1Q03518 808 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 SLC10A6Q3KNW5 377 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 DCAF4L1Q3SXM0 396 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 SEZ6Q53EL9 994 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 NELFCDQ8IXH7 590 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 CMTR2Q8IYT2 770 aaKnown RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 GUF1Q8N442 669 aaKnown RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 HELQQ8TDG4 1101 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 CLP1Q92989 425 aaKnown RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 FBXL18Q96ME1 805 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 ZFP42Q96MM3 310 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 MED15Q96RN5 788 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 TMEM117Q9H0C3 514 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 GZF1Q9H116 711 aaPredicted RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 NKX2-4Q9H2Z4 354 aa9.85□□□□□ -0.83
CHD8-214ENST00000557727 TTYH1Q9H313 450 aaPredicted RBP9.85□□□□□ -0.83
CHD8-214ENST00000557727 RSAD1Q9HA92 442 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms