RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 IGFBP6P24592 240 aaPredicted RBP17.58■□□□□ 0.4
SCFD1-224ENST00000557713 HOXA9P31269 272 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 NTHL1P78549 312 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 ELAVL2Q12926 359 aaKnown RBP17.58■□□□□ 0.4
SCFD1-224ENST00000557713 PPP2R5AQ15172 486 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 TMEM132AQ24JP5 1023 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 PDXDC1Q6P996 788 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 ST13P5Q8NFI4 369 aaPredicted RBP17.58■□□□□ 0.4
SCFD1-224ENST00000557713 C8orf76Q96K31 380 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 RPP25Q9BUL9 199 aaKnown RBP17.58■□□□□ 0.4
SCFD1-224ENST00000557713 TBC1D17Q9HA65 648 aa17.58■□□□□ 0.4
SCFD1-224ENST00000557713 TMEM189-UBE2V1I3L0A0 370 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 SEC24BO95487 1268 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 C8AP07357 584 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 LIG1P18858 919 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 FGFR3P22607 806 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
SCFD1-224ENST00000557713 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCFD1-224ENST00000557713 EFNA5P52803 228 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 RAB33AQ14088 237 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 DCAF4L1Q3SXM0 396 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 PPM1LQ5SGD2 360 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 LIN9Q5TKA1 542 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 DCLRE1AQ6PJP8 1040 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 CD300LGQ6UXG3 332 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
SCFD1-224ENST00000557713 FGF14Q92915 247 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 PPP1R10Q96QC0 940 aaKnown RBP17.57■□□□□ 0.4
SCFD1-224ENST00000557713 LLPHQ9BRT6 129 aaKnown RBP17.57■□□□□ 0.4
SCFD1-224ENST00000557713 KIFC3Q9BVG8 833 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 ARHGEF3Q9NR81 526 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 DLGAP2Q9P1A6 1054 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 CDH7Q9ULB5 785 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 GDAQ9Y2T3 454 aa17.57■□□□□ 0.4
SCFD1-224ENST00000557713 VPS13AQ96RL7 3174 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 POU2F2P09086 479 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 OR1D2P34982 312 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 CCT6AP40227 531 aaKnown RBP17.56■□□□□ 0.4
SCFD1-224ENST00000557713 UVSSAQ2YD98 709 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 TTC38Q5R3I4 469 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 ATF7IP2Q5U623 682 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 HAUS3Q68CZ6 603 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 PARM1Q6UWI2 310 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 ADSSL1Q8N142 457 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 FBXO18Q8NFZ0 1043 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 KIFAP3Q92845 792 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 IFT74Q96LB3 600 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 BHMT2Q9H2M3 363 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 SIT1Q9Y3P8 196 aa17.56■□□□□ 0.4
SCFD1-224ENST00000557713 CCL16O15467 120 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
SCFD1-224ENST00000557713 NEFLP07196 543 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 RFX1P22670 979 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 CLCNKBP51801 687 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 STARD6P59095 220 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 GPC5P78333 572 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 PDIA5Q14554 519 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 AXDND1Q5T1B0 1012 aaPredicted RBP17.55■□□□□ 0.4
SCFD1-224ENST00000557713 RSPO2Q6UXX9 243 aaPredicted RBP17.55■□□□□ 0.4
SCFD1-224ENST00000557713 ITFG1Q8TB96 612 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 FGF13Q92913 245 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 LRWD1Q9UFC0 647 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 KIAA1024Q9UPX6 916 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
SCFD1-224ENST00000557713 K7ERI5 159 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 XYLBO75191 536 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 B3GAT3O94766 335 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 DCNP07585 359 aaKnown RBP17.54■□□□□ 0.4
SCFD1-224ENST00000557713 TRAPPC10P48553 1259 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 UPP1Q16831 310 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 XKR4Q5GH76 650 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 GLRA4Q5JXX5 417 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 ALKAL1Q6UXT8 129 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 RTL10Q7L3V2 364 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 SLC7A14Q8TBB6 771 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 UROC1Q96N76 676 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 SEMA4AQ9H3S1 761 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 PTPRHQ9HD43 1115 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 BACE2Q9Y5Z0 518 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 VWA8A3KMH1 1905 aa17.54■□□□□ 0.4
SCFD1-224ENST00000557713 SMIM28A0A1B0GU29 152 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 NBR1Q14596 966 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 SPECC1Q5M775 1068 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 IGSF22Q8N9C0 903 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 C3orf58Q8NDZ4 430 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 ACO2Q99798 780 aaKnown RBP17.53■□□□□ 0.4
SCFD1-224ENST00000557713 GOLGA2P5Q9HBQ8 144 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
SCFD1-224ENST00000557713 HCFC1R1Q9NWW0 138 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 DNMT3BQ9UBC3 853 aaKnown RBP17.53■□□□□ 0.4
SCFD1-224ENST00000557713 POLIQ9UNA4 740 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 CDY1Q9Y6F8 540 aa17.53■□□□□ 0.4
SCFD1-224ENST00000557713 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.4
SCFD1-224ENST00000557713 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms