RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CMASQ8NFW8 434 aaPredicted RBP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 URGCPQ8TCY9 931 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 RUBCNQ92622 972 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 STAMQ92783 540 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ZNF707Q96C28 371 aaPredicted RBP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 CNTNAP3BQ96NU0 1288 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 CNTNAP3Q9BZ76 1288 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ZMYND12Q9H0C1 365 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 UNC45AQ9H3U1 944 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ARHGEF3Q9NR81 526 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 MRPL17Q9NRX2 175 aaKnown RBP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 DLL3Q9NYJ7 618 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 STK39Q9UEW8 545 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 FKBPLQ9UIM3 349 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 SIT1Q9Y3P8 196 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 PCDHB2Q9Y5E7 798 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ZFHX4Q86UP3 3567 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 WDR81Q562E7 1941 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 DOCK8Q8NF50 2099 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 KLF18A0A0U1RQI7 1052 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 F8W810 466 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 NRP1O14786 923 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 INPPL1O15357 1258 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 EDIL3O43854 480 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 GAS7O60861 476 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 LRRN2O75325 713 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 STBD1O95210 358 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 GLUD1P00367 558 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 POMCP01189 267 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SOD2P04179 222 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 URODP06132 367 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 ADH1AP07327 375 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 GLULP15104 373 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SFNP31947 248 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 ADD1P35611 737 aaKnown RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 DNM2P50570 870 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 JAK3P52333 1124 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 CDC42EP1Q00587 391 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 HTR4Q13639 388 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 RSPO4Q2I0M5 234 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 XKR3Q5GH77 459 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 LRCH2Q5VUJ6 765 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 EGFLAMQ63HQ2 1017 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 VASH1Q7L8A9 365 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 CATSPER4Q7RTX7 472 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 MRPL10Q7Z7H8 261 aaKnown RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 ZNF410Q86VK4 478 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 MAML2Q8IZL2 1156 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 PJA1Q8NG27 643 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SMG7Q92540 1137 aaKnown RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 PGBD4Q96DM1 585 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 CCDC136Q96JN2 1154 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 NLRP4Q96MN2 994 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 ASB16Q96NS5 453 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 RPS6KC1Q96S38 1066 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 RIT2Q99578 217 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 OCSTAMPQ9BR26 566 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 TMEM175Q9BSA9 504 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 ESYT1Q9BSJ8 1104 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 HERC2P3Q9BVR0 1158 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 NIFKQ9BYG3 293 aaKnown RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 RHOBTB2Q9BYZ6 727 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 FOXQ1Q9C009 403 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 RSAD1Q9HA92 442 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 IFT122Q9HBG6 1241 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 C6orf50Q9HD87 102 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 ANO2Q9NQ90 1003 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 AGPAT5Q9NUQ2 364 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 MARCH5Q9NX47 278 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 SUCLA2Q9P2R7 463 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 FAN1Q9Y2M0 1017 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 PRG3Q9Y2Y8 225 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-207ENST00000557470 MAP4K5Q9Y4K4 846 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 CACNA1IQ9P0X4 2223 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
VPS33B-207ENST00000557470 CNTNAP2Q9UHC6 1331 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 FANCMQ8IYD8 2048 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 ANHXE9PGG2 379 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 MAFO75444 373 aaPredicted RBP6.54□□□□□ -1.36
VPS33B-207ENST00000557470 PSMD10O75832 226 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 PAPLNO95428 1278 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 EFEMP2O95967 443 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 ALDH2P05091 517 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 LAMP2P13473 410 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 HOXA11P31270 313 aaPredicted RBP6.54□□□□□ -1.36
VPS33B-207ENST00000557470 GLUD2P49448 558 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 RCAN1P53805 252 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 ADCK5Q3MIX3 580 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 UBXN11Q5T124 520 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 C6orf118Q5T5N4 469 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 KIAA0319Q5VV43 1072 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 PLA2G4FQ68DD2 849 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 ELMSAN1Q6PJG2 1045 aa6.54□□□□□ -1.36
VPS33B-207ENST00000557470 DCLRE1AQ6PJP8 1040 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms