RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 CD302Q8IX05 232 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 ZC3H3Q8IXZ2 948 aaKnown RBP17.87■□□□□ 0.45
PCNX4-213ENST00000556907 TGS1Q96RS0 853 aaKnown RBP17.87■□□□□ 0.45
PCNX4-213ENST00000556907 RPS6KC1Q96S38 1066 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 DUSP9Q99956 384 aaKnown RBP17.87■□□□□ 0.45
PCNX4-213ENST00000556907 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 NKX2-4Q9H2Z4 354 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 KIAA1586Q9HCI6 787 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 AGO2Q9UKV8 859 aaKnown RBP17.87■□□□□ 0.45
PCNX4-213ENST00000556907 TRAF3IP3Q9Y228 551 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 HES2Q9Y543 173 aa17.87■□□□□ 0.45
PCNX4-213ENST00000556907 LINC01553A4QN01 128 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 ARL5CA6NH57 179 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 PDXKO00764 312 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 RECQL4O94761 1208 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 RB1P06400 928 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 MYOGP15173 224 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 AKAP5P24588 427 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 ERVK-21P61565 698 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 MYBPC2Q14324 1141 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 NFIL3Q16649 462 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 ANKRD40Q6AI12 368 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 ARMCX5Q6P1M9 558 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 SARM1Q6SZW1 724 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 NELFCDQ8IXH7 590 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 C12orf56Q8IXR9 622 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 THNSL1Q8IYQ7 743 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 GAD1Q99259 594 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 APOL6Q9BWW8 343 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 PLVAPQ9BX97 442 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 TRIP11Q15643 1979 aa17.86■□□□□ 0.45
PCNX4-213ENST00000556907 LCHNA4D1U4 455 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 MEIS3P2A8K0S8 358 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 RBAK-RBAKDNI3L0D1 243 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 HARSP12081 509 aaKnown RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 LAG3P18627 525 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 ADSSP30520 456 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 MLH1P40692 756 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 TAP1Q03518 808 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 GRIK3Q13003 919 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 PAN2Q504Q3 1202 aaKnown RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 XKR4Q5GH76 650 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 ZNF697Q5TEC3 545 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 ALKAL1Q6UXT8 129 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 LRRC55Q6ZSA7 311 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 FAM193BQ96PV7 902 aaPredicted RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 ZNF576Q9H609 170 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 RPF1Q9H9Y2 349 aaKnown RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 FANCLQ9NW38 375 aa17.85■□□□□ 0.45
PCNX4-213ENST00000556907 CPSF3Q9UKF6 684 aaKnown RBP17.85■□□□□ 0.45
PCNX4-213ENST00000556907 LAMA3Q16787 3333 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 C5orf67F2Z3F1 127 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 SOX1O00570 391 aaPredicted RBP17.84■□□□□ 0.45
PCNX4-213ENST00000556907 TGFB1I1O43294 461 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 CALUO43852 315 aaPredicted RBP17.84■□□□□ 0.45
PCNX4-213ENST00000556907 FAM189A1O60320 539 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 THP07101 528 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 ADRB2P07550 413 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 GATMP50440 423 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 SPAG1Q07617 926 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 SPOUT1Q5T280 376 aaKnown RBP17.84■□□□□ 0.45
PCNX4-213ENST00000556907 SLC9A9Q8IVB4 645 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 CSGALNACT2Q8N6G5 542 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 CEP120Q8N960 986 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 TMEM175Q9BSA9 504 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 HAPLN2Q9GZV7 340 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 AGPAT3Q9NRZ7 376 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 SLC38A7Q9NVC3 462 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 TBC1D13Q9NVG8 400 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 INPP5FQ9Y2H2 1132 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 PCDHB12Q9Y5F1 795 aa17.84■□□□□ 0.45
PCNX4-213ENST00000556907 MRPL42Q9Y6G3 142 aaKnown RBP17.84■□□□□ 0.45
PCNX4-213ENST00000556907 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.45
PCNX4-213ENST00000556907 EXTL3O43909 919 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 FGFR1OPO95684 399 aaKnown RBP17.83■□□□□ 0.44
PCNX4-213ENST00000556907 KCNE1P15382 129 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 PPM1AP35813 382 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 BMPR1AP36894 532 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 FXR1P51114 621 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCNX4-213ENST00000556907 OSTNP61366 133 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 FAM114A1Q8IWE2 563 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 TMEM192Q8IY95 271 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 GPD1LQ8N335 351 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 LRCH3Q96II8 777 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 SNX27Q96L92 541 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 CEP63Q96MT8 703 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 ASB7Q9H672 318 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 CWH43Q9H720 699 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 SAMSN1Q9NSI8 373 aaKnown RBP17.83■□□□□ 0.44
PCNX4-213ENST00000556907 CNTN3Q9P232 1028 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 STK39Q9UEW8 545 aa17.83■□□□□ 0.44
PCNX4-213ENST00000556907 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
PCNX4-213ENST00000556907 IL18RAPO95256 599 aa17.82■□□□□ 0.44
PCNX4-213ENST00000556907 ALDH2P05091 517 aa17.82■□□□□ 0.44
PCNX4-213ENST00000556907 RPL13P26373 211 aaKnown RBP17.82■□□□□ 0.44
PCNX4-213ENST00000556907 ALDH7A1P49419 539 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms