RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TNNI1P19237 187 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ECHS1P30084 290 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CYP2C19P33261 490 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 EPHX2P34913 555 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 RFC5P40937 340 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 TNFSF9P41273 254 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PDE6CP51160 858 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 GPC5P78333 572 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CLDN10P78369 228 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CDR2Q01850 454 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 NEDD9Q14511 834 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 MESDQ14696 234 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ZACNQ401N2 412 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 LLGL2Q6P1M3 1020 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PHLDB2Q86SQ0 1253 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 RHOT2Q8IXI1 618 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PRPF31Q8WWY3 499 aaKnown RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 SEPT1Q8WYJ6 367 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ZNF653Q96CK0 615 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 MSTO1Q9BUK6 570 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 NUP85Q9BW27 656 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CELF4Q9BZC1 486 aaKnown RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 NEUROG2Q9H2A3 272 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ACBD3Q9H3P7 528 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 C1orf112Q9NSG2 853 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ALG6Q9Y672 507 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CNTNAP2Q9UHC6 1331 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 DNAJC25-GNG10A0A024R161 153 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 GOLGA6BA6NDN3 693 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 SART1O43290 800 aaKnown RBP10.88□□□□□ -0.67
TMEM260-211ENST00000556648 ADCY3O60266 1144 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 MAFO75444 373 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-211ENST00000556648 CFHP08603 1231 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 CYP2C8P10632 490 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 COMTP21964 271 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 HADHBP55084 474 aaKnown RBP10.88□□□□□ -0.67
TMEM260-211ENST00000556648 BIRC3Q13489 604 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 HSP90B2PQ58FF3 399 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 CELF3Q5SZQ8 465 aaKnown RBP10.88□□□□□ -0.67
TMEM260-211ENST00000556648 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 RNPC3Q96LT9 517 aaKnown RBP10.88□□□□□ -0.67
TMEM260-211ENST00000556648 FNBP1Q96RU3 617 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 MED4Q9NPJ6 270 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 AMACRQ9UHK6 382 aa10.88□□□□□ -0.67
TMEM260-211ENST00000556648 BHMG1C9JSJ3 638 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-211ENST00000556648 SLC25A27O95847 323 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 CYP1A2P05177 515 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 SRGAP2CP0DJJ0 459 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 NF2P35240 595 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 GCNT1Q02742 428 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 PAK2Q13177 524 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 CLEC16AQ2KHT3 1053 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 C2CD6Q53TS8 623 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-211ENST00000556648 GJC2Q5T442 439 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-211ENST00000556648 EMBQ6PCB8 327 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 GLG1Q92896 1179 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
TMEM260-211ENST00000556648 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TRIM51Q9BSJ1 452 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 CCDC113Q9H0I3 377 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 EFCC1Q9HA90 598 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TTI1O43156 1089 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 LGR5O75473 907 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 GZMAP12544 262 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
TMEM260-211ENST00000556648 LMAN1P49257 510 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 ENPEPQ07075 957 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 LAMTOR4Q0VGL1 99 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 PLCB4Q15147 1175 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TCEAL1Q15170 157 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 USP37Q86T82 979 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TMEM130Q8N3G9 435 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 ZNF564Q8TBZ8 553 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-211ENST00000556648 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 KCNN1Q92952 543 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 SPATA33Q96N06 139 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 ZSWIM1Q9BR11 485 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TRIM7Q9C029 511 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 FAM204AQ9H8W3 233 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 KIAA1586Q9HCI6 787 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 TRPC6Q9Y210 931 aa10.87□□□□□ -0.67
TMEM260-211ENST00000556648 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 FAM189A1O60320 539 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 MSCO60682 206 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 ZC3H11AO75152 810 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMEM260-211ENST00000556648 MTA2O94776 668 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 TGFB3P10600 412 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 OSBPP22059 807 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 POU5F1Q01860 360 aaKnown RBP10.86□□□□□ -0.67
TMEM260-211ENST00000556648 KCTD2Q14681 263 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 SLFN12LQ6IEE8 588 aa10.86□□□□□ -0.67
TMEM260-211ENST00000556648 ACAD10Q6JQN1 1059 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms