RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SMTNP53814 917 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 ATP2C1P98194 919 aaPredicted RBP11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 NHLH1Q02575 133 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 ELAVL2Q12926 359 aaKnown RBP11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 DHX8Q14562 1220 aaKnown RBP11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 PSMD5Q16401 504 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 IER5LQ5T953 404 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 KCNK18Q7Z418 384 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 PRRX2Q99811 253 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 MMTAG2Q9BU76 263 aaKnown RBP11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 TARS2Q9BW92 718 aaKnown RBP11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 PLEKHA4Q9H4M7 779 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 FNIP2Q9P278 1114 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 POLIQ9UNA4 740 aa11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
SPTLC2-205ENST00000556607 CITO14578 2027 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 TECTAO75443 2155 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 STK25O00506 426 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 EFEMP2O95967 443 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 AVPR2P30518 371 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CLCNKBP51801 687 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 VCPP55072 806 aaKnown RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 LIN9Q5TKA1 542 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 C1orf186Q6ZWK4 172 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 GET4Q7L5D6 327 aaPredicted RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CEP120Q8N960 986 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CMASQ8NFW8 434 aaPredicted RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 HDAC7Q8WUI4 952 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 BICD1Q96G01 975 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CALML4Q96GE6 196 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 ACAP3Q96P50 834 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 ACO2Q99798 780 aaKnown RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 TIPINQ9BVW5 301 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CDT1Q9H211 546 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 C17orf75Q9HAS0 396 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 GOLGA2P5Q9HBQ8 144 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 WDR6Q9NNW5 1121 aaKnown RBP11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 ANKFY1Q9P2R3 1169 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 KCNG1Q9UIX4 513 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 FBXL21Q9UKT6 434 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 CLUHO75153 1309 aa11.6□□□□□ -0.55
SPTLC2-205ENST00000556607 VWA8A3KMH1 1905 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 SMIM28A0A1B0GU29 152 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 VPS37CA5D8V6 355 aaPredicted RBP11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 TRAPPC3O43617 180 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 PLA2G4BP0C869 781 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 RFX1P22670 979 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 UBA7P41226 1012 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 GRM5P41594 1212 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 PTPN5P54829 565 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 TDGQ13569 410 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 PPM1LQ5SGD2 360 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 ARL6IP4Q66PJ3 421 aaKnown RBP11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 DCLRE1AQ6PJP8 1040 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 MPZL3Q6UWV2 235 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 CYP26C1Q6V0L0 522 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 DAW1Q8N136 415 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 PRSS33Q8NF86 280 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 FLCNQ8NFG4 579 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 LNX1Q8TBB1 728 aaPredicted RBP11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 UROC1Q96N76 676 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 PNMA5Q96PV4 448 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 CLSTN3Q9BQT9 956 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 ZDHHC7Q9NXF8 308 aa11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 LARSQ9P2J5 1176 aaKnown RBP11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
SPTLC2-205ENST00000556607 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 I3L4J1 428 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 ZMYND10O75800 440 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 KRT18P05783 430 aaKnown RBP11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 MCF2P10911 925 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 PLS3P13797 630 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 OR1D2P34982 312 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 BRCC3P46736 316 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 MRE11P49959 708 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 MAPK7Q13164 816 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 NAB2Q15742 525 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 SEZ6Q53EL9 994 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 HYIQ5T013 277 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 GPR65Q8IYL9 337 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 RSAD2Q8WXG1 361 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 PIK3R5Q8WYR1 880 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 ZBTB45Q96K62 511 aaPredicted RBP11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 ZHX3Q9H4I2 956 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 SLC38A7Q9NVC3 462 aa11.58□□□□□ -0.56
SPTLC2-205ENST00000556607 ARHGAP28Q9P2N2 729 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms