RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 LNX1Q8TBB1 728 aaPredicted RBP24.84■■□□□ 1.57
ACTN1-220ENST00000556433 PIK3R5Q8WYR1 880 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 PHOX2BQ99453 314 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 CLSTN3Q9BQT9 956 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 MMTAG2Q9BU76 263 aaKnown RBP24.84■■□□□ 1.57
ACTN1-220ENST00000556433 RUSC1Q9BVN2 902 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 PRKD2Q9BZL6 878 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 MFSD1Q9H3U5 465 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 TMEM134Q9H6X4 195 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 IGSF9Q9P2J2 1179 aa24.84■■□□□ 1.57
ACTN1-220ENST00000556433 PAPLNO95428 1278 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 DMP1Q13316 513 aaPredicted RBP24.83■■□□□ 1.57
ACTN1-220ENST00000556433 PSMD5Q16401 504 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 C1orf186Q6ZWK4 172 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 KCNK18Q7Z418 384 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 DRC1Q96MC2 740 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 ACO2Q99798 780 aaKnown RBP24.83■■□□□ 1.57
ACTN1-220ENST00000556433 KMT5AQ9NQR1 393 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 C2orf16Q68DN1 1984 aa24.83■■□□□ 1.57
ACTN1-220ENST00000556433 DENND4AQ7Z401 1863 aa24.83■■□□□ 1.56
ACTN1-220ENST00000556433 H3BQV1 296 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 ZMYND10O75800 440 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 B3GAT3O94766 335 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 GJB2P29033 226 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 NUBP1P53384 320 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 DCLRE1AQ6PJP8 1040 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 PPP1R10Q96QC0 940 aaKnown RBP24.82■■□□□ 1.56
ACTN1-220ENST00000556433 MYADMQ96S97 322 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 MRPL4Q9BYD3 311 aaKnown RBP24.82■■□□□ 1.56
ACTN1-220ENST00000556433 RBM19Q9Y4C8 960 aaKnown RBP24.82■■□□□ 1.56
ACTN1-220ENST00000556433 PHLPP2Q6ZVD8 1323 aa24.82■■□□□ 1.56
ACTN1-220ENST00000556433 WDFY4Q6ZS81 3184 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 SFI1A8K8P3 1242 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 GRM5P41594 1212 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 YARSP54577 528 aaKnown RBP24.81■■□□□ 1.56
ACTN1-220ENST00000556433 ATP2C1P98194 919 aaPredicted RBP24.81■■□□□ 1.56
ACTN1-220ENST00000556433 PDXDC1Q6P996 788 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 TMEM105Q8N8V8 129 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 CEP120Q8N960 986 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 CCDC94Q9BW85 323 aaPredicted RBP24.81■■□□□ 1.56
ACTN1-220ENST00000556433 TARS2Q9BW92 718 aaKnown RBP24.81■■□□□ 1.56
ACTN1-220ENST00000556433 IRF2BPLQ9H1B7 796 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 CDT1Q9H211 546 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 C17orf75Q9HAS0 396 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 PTPRHQ9HD43 1115 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 ARHGAP28Q9P2N2 729 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 EPS15L1Q9UBC2 864 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 DUSP12Q9UNI6 340 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 KMT2EQ8IZD2 1858 aa24.81■■□□□ 1.56
ACTN1-220ENST00000556433 SMIM28A0A1B0GU29 152 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 IGFBP6P24592 240 aaPredicted RBP24.8■■□□□ 1.56
ACTN1-220ENST00000556433 CLCNKBP51801 687 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 OSTNP61366 133 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 MAPK7Q13164 816 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 ZNF568Q3ZCX4 644 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 ASTLQ6HA08 431 aaPredicted RBP24.8■■□□□ 1.56
ACTN1-220ENST00000556433 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.8■■□□□ 1.56
ACTN1-220ENST00000556433 TAS1R3Q7RTX0 852 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 RSAD2Q8WXG1 361 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 UROC1Q96N76 676 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 PLIN2Q99541 437 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 TCHPQ9BT92 498 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 UPF2Q9HAU5 1272 aaKnown RBP24.8■■□□□ 1.56
ACTN1-220ENST00000556433 FBXW11Q9UKB1 542 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 FBXL21Q9UKT6 434 aa24.8■■□□□ 1.56
ACTN1-220ENST00000556433 TMEM189-UBE2V1I3L0A0 370 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 SLC16A4O15374 487 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 ADAM12O43184 909 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 CD2BP2O95400 341 aaKnown RBP24.79■■□□□ 1.56
ACTN1-220ENST00000556433 LIN9Q5TKA1 542 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 FLCNQ8NFG4 579 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 ATOH1Q92858 354 aaPredicted RBP24.79■■□□□ 1.56
ACTN1-220ENST00000556433 PNMA5Q96PV4 448 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 TIPINQ9BVW5 301 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 TOPORSQ9NS56 1045 aaPredicted RBP24.79■■□□□ 1.56
ACTN1-220ENST00000556433 FAM86C1Q9NVL1 165 aa24.79■■□□□ 1.56
ACTN1-220ENST00000556433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.79■■□□□ 1.569e-7■■■■■ 31.6
ACTN1-220ENST00000556433 MTCL1Q9Y4B5 1905 aaKnown RBP24.78■■□□□ 1.56
ACTN1-220ENST00000556433 VWA3AA6NCI4 1184 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 GALR2O43603 387 aaPredicted RBP24.78■■□□□ 1.56
ACTN1-220ENST00000556433 NARSO43776 548 aaKnown RBP24.78■■□□□ 1.56
ACTN1-220ENST00000556433 FGFR3P22607 806 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 GUCY2CP25092 1073 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 CLCN5P51795 746 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 RAD51AP2Q09MP3 1159 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 UPP1Q16831 310 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 PPM1LQ5SGD2 360 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 HYIQ5T013 277 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 CD300LGQ6UXG3 332 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 ALKAL1Q6UXT8 129 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 GET4Q7L5D6 327 aaPredicted RBP24.78■■□□□ 1.56
ACTN1-220ENST00000556433 NTPCRQ9BSD7 190 aaKnown RBP24.78■■□□□ 1.56
ACTN1-220ENST00000556433 GOLGA2P5Q9HBQ8 144 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 KCNG1Q9UIX4 513 aa24.78■■□□□ 1.56
ACTN1-220ENST00000556433 H0Y858 1186 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 TRAPPC3O43617 180 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 C8AP07357 584 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 MCF2P10911 925 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 LAMP2P13473 410 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 OR1D2P34982 312 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms