RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NTRK3Q16288 839 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 NCAPH2Q6IBW4 605 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 SLC27A1Q6PCB7 646 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 C4orf19Q8IY42 314 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 CELF5Q8N6W0 485 aaKnown RBP15.46■□□□□ 0.07
ACTN1-219ENST00000556432 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-219ENST00000556432 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
ACTN1-219ENST00000556432 BRD9Q9H8M2 597 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 RGL1Q9NZL6 768 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 NID2Q14112 1375 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 MAN2B1O00754 1011 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 ZBTB39O15060 712 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 RHOP08100 348 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 IFNAR1P17181 557 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 OR1D2P34982 312 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 CTTNQ14247 550 aaKnown RBP15.45■□□□□ 0.06
ACTN1-219ENST00000556432 GRM2Q14416 872 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 TMEM132AQ24JP5 1023 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 BLOC1S2Q6QNY1 142 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-219ENST00000556432 ASAP3Q8TDY4 903 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 FAM20AQ96MK3 541 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 PLA2G2FQ9BZM2 168 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 CHRDQ9H2X0 955 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
ACTN1-219ENST00000556432 LRP3O75074 770 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 POU2F2P09086 479 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 CCR3P51677 355 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 SSRP1Q08945 709 aaKnown RBP15.44■□□□□ 0.06
ACTN1-219ENST00000556432 CAPSQ13938 189 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 SIM2Q14190 667 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-219ENST00000556432 AMHR2Q16671 573 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 TANGO2Q6ICL3 276 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 PRR23CQ6ZRP0 262 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 KRT25Q7Z3Z0 450 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 TPH2Q8IWU9 490 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 DNASE1L2Q92874 299 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
ACTN1-219ENST00000556432 ZSWIM4Q9H7M6 989 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 XPNPEP1Q9NQW7 623 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 SEMA4GQ9NTN9 838 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 RALYQ9UKM9 306 aaKnown RBP15.44■□□□□ 0.06
ACTN1-219ENST00000556432 ANGPTL2Q9UKU9 493 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 ZMYM2Q9UBW7 1377 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 F5P12259 2224 aa15.44■□□□□ 0.06
ACTN1-219ENST00000556432 CNOT1A5YKK6 2376 aaKnown RBP15.43■□□□□ 0.06
ACTN1-219ENST00000556432 CCDC194A0A1B0GVG4 234 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 THP07101 528 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 CEBPBP17676 345 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 FZD5Q13467 585 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 RAB33AQ14088 237 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 EPHA7Q15375 998 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 SLC5A9Q2M3M2 681 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 IL31Q6EBC2 164 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-219ENST00000556432 ELSPBP1Q96BH3 223 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 KCNMB3Q9NPA1 279 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 CDY1Q9Y6F8 540 aa15.43■□□□□ 0.06
ACTN1-219ENST00000556432 LRRIQ4A6NIV6 560 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 CPLX1O14810 134 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 CCNT1O60563 726 aaKnown RBP15.42■□□□□ 0.06
ACTN1-219ENST00000556432 LRG1P02750 347 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 TDGF1P13385 188 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 CSRP2Q16527 193 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 PPP4R3AQ6IN85 833 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-219ENST00000556432 DDX1Q92499 740 aaKnown RBP15.42■□□□□ 0.06
ACTN1-219ENST00000556432 FAM3CQ92520 227 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 IER2Q9BTL4 223 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 TRMT61BQ9BVS5 477 aaKnown RBP15.42■□□□□ 0.06
ACTN1-219ENST00000556432 POLR3FQ9H1D9 316 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-219ENST00000556432 LMAN1LQ9HAT1 526 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 ZFP14Q9HCL3 533 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 ATRXP46100 2492 aa15.42■□□□□ 0.06
ACTN1-219ENST00000556432 ARID2Q68CP9 1835 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 BAHCC1Q9P281 2608 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 PRRG1O14668 218 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 GDF9O60383 454 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 GCFC2P16383 781 aaKnown RBP15.41■□□□□ 0.06
ACTN1-219ENST00000556432 GLRA2P23416 452 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 ELF1P32519 619 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 CXCL12P48061 93 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 SATB1Q01826 763 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 POU5F1BQ06416 359 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 AASDHQ4L235 1098 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-219ENST00000556432 HEATR6Q6AI08 1181 aaKnown RBP15.41■□□□□ 0.06
ACTN1-219ENST00000556432 GALNT17Q6IS24 598 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 NEK8Q86SG6 692 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 DAGLBQ8NCG7 672 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 IRF7Q92985 503 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 CORO1BQ9BR76 489 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 SNTG2Q9NY99 539 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 MTRRQ9UBK8 725 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 PIAS3Q9Y6X2 628 aa15.41■□□□□ 0.06
ACTN1-219ENST00000556432 CEP295Q9C0D2 2601 aa15.4■□□□□ 0.06
ACTN1-219ENST00000556432 SHISA7A6NL88 538 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms