RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 RBM23Q86U06 439 aaKnown RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 VPS52Q8N1B4 723 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 CEP120Q8N960 986 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 ADAMTS19Q8TE59 1207 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 CCDC94Q9BW85 323 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 IGFLR1Q9H665 355 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 TOPORSQ9NS56 1045 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-205ENST00000556310 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 GDAQ9Y2T3 454 aa12.64□□□□□ -0.39
SLIRP-205ENST00000556310 C2orf71A6NGG8 1288 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 MYMKA6NI61 221 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 HIDE1A8MVS5 230 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 DLL1O00548 723 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 SNPHO15079 494 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 LINC01565O15544 149 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 GLP2RO95838 553 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 PIGRP01833 764 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 THP07101 528 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 CTSAP10619 480 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 ME1P48163 572 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 NDUFV1P49821 464 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 PUS10Q3MIT2 529 aaKnown RBP12.63□□□□□ -0.39
SLIRP-205ENST00000556310 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 PDILTQ8N807 584 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 MRPL43Q8N983 215 aaKnown RBP12.63□□□□□ -0.39
SLIRP-205ENST00000556310 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-205ENST00000556310 DNAJC19Q96DA6 116 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 BICD1Q96G01 975 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 CUEDC2Q9H467 287 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 ST6GALNAC4Q9H4F1 302 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 TBX20Q9UMR3 447 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 ZDHHC9Q9Y397 364 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 IRAK3Q9Y616 596 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 MUC3AQ02505 3323 aa12.63□□□□□ -0.39
SLIRP-205ENST00000556310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 PER2O15055 1255 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 EFEMP2O95967 443 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 SOD2P04179 222 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 GAP43P17677 238 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 GTF2BQ00403 316 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 MCL1Q07820 350 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 NAB2Q15742 525 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 RNF168Q8IYW5 571 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 HVCN1Q96D96 273 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 ZBTB45Q96K62 511 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 MSLNLQ96KJ4 702 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 SNX27Q96L92 541 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-205ENST00000556310 COLEC11Q9BWP8 271 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 PCDHA7Q9UN72 937 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 FAM50BQ9Y247 325 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
SLIRP-205ENST00000556310 VWA8A3KMH1 1905 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 FRMD3A2A2Y4 597 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 F8W810 466 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 CLDN3O15551 220 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 URODP06132 367 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
SLIRP-205ENST00000556310 CA8P35219 290 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 LIG4P49917 911 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 OSTNP61366 133 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 KRT85P78386 507 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
SLIRP-205ENST00000556310 KCNC3Q14003 757 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-205ENST00000556310 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 GLRA4Q5JXX5 417 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 FUT10Q6P4F1 479 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 TMEM184AQ6ZMB5 413 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 AUTS2Q8WXX7 1259 aa12.61□□□□□ -0.39
SLIRP-205ENST00000556310 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms