RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 MCM7P33993 719 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 RECQLP46063 649 aaPredicted RBP4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 ALDH1A3P47895 512 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 MAN2A2P49641 1150 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 FLT3LGP49771 235 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 SLC16A1P53985 500 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 MIIPQ5JXC2 388 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF572Q7Z3I7 529 aaPredicted RBP4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 OR52N2Q8NGI0 321 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 PHACTR3Q96KR7 559 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 POGKQ9P215 609 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 SAP30BPQ9UHR5 308 aaKnown RBP4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 XDHP47989 1333 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 TBKBP1A7MCY6 615 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 LEFTY2O00292 366 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 IL33O95760 270 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 GUCY1A2P33402 732 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 RAB27AP51159 221 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 KRT85P78386 507 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 MCL1Q07820 350 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 FOXE3Q13461 319 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 VPS72Q15906 364 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 PLEKHG6Q3KR16 790 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 RNF207Q6ZRF8 634 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 MIGA2Q7L4E1 593 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 DOK3Q7L591 496 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 GPRIN1Q7Z2K8 1008 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 TMPRSS6Q8IU80 811 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 SYT12Q8IV01 421 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 CMTR2Q8IYT2 770 aaKnown RBP4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 CPA6Q8N4T0 437 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 TFAP2CQ92754 450 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 CHFRQ96EP1 664 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 PLEKHG4BQ96PX9 1271 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 MRI1Q9BV20 369 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 TMEM140Q9NV12 185 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 SORCS3Q9UPU3 1222 aa4.76□□□□□ -1.65
SUPT16H-206ENST00000556309 PNPLA7Q6ZV29 1317 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 MYBBP1AQ9BQG0 1328 aaKnown RBP4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 GOLGA6L6A8MZA4 724 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 B5MCH6 92 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 GPR32O75388 356 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 DDCP20711 480 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 APOBEC3AP31941 199 aaPredicted RBP4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 WASP42768 502 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 FXR1P51114 621 aaKnown RBP eCLIP4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 INHBCP55103 352 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 ADKP55263 362 aaKnown RBP4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 TARDBPQ13148 414 aaKnown RBP eCLIP4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 SP140Q13342 867 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 BMT2Q1RMZ1 405 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 UBE3BQ7Z3V4 1068 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 CATIPQ7Z7H3 387 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 RSPH3Q86UC2 560 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 MIER2Q8N344 545 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 OR10H5Q8NGA6 315 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 HDAC10Q969S8 669 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 HSPBAP1Q96EW2 488 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 TMX3Q96JJ7 454 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 MANSC1Q9H8J5 431 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 TDP1Q9NUW8 608 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 SLC23A1Q9UHI7 598 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 THRAP3Q9Y2W1 955 aaKnown RBP4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 PCDHB1Q9Y5F3 818 aa4.75□□□□□ -1.65
SUPT16H-206ENST00000556309 AKAP10O43572 662 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 PF4V1P10720 104 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 IL2RBP14784 551 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ATP5JP18859 108 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 CLRN1P58418 232 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 RNASE9P60153 205 aaKnown RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ATP8B2P98198 1209 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 PTH1RQ03431 593 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 MTM1Q13496 603 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 DCAF17Q5H9S7 520 aaPredicted RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ODR4Q5SWX8 454 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ATXN7L2Q5T6C5 722 aaPredicted RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 EFCAB12Q6NXP0 572 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF529Q6P280 563 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ANKRD13AQ8IZ07 590 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 CPT1CQ8TCG5 803 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 NDC1Q9BTX1 674 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 TEX101Q9BY14 249 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 RTFDC1Q9BY42 306 aaPredicted RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 CSRNP2Q9H175 543 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF768Q9H5H4 540 aaKnown RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 MOCS1Q9NZB8 636 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 CEP72Q9P209 647 aa4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 EIF2B4Q9UI10 523 aaKnown RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 ING1Q9UK53 422 aaPredicted RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 G3BP2Q9UN86 482 aaKnown RBP4.74□□□□□ -1.65
SUPT16H-206ENST00000556309 TCRBV7S2A1N4TA0A589 114 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 LRRC14BA6NHZ5 514 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 GRXCR1A8MXD5 290 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 KIAA0391O15091 583 aaKnown RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 RPS6KA4O75676 772 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 ABLIM3O94929 683 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 SCAF4O95104 1147 aaKnown RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 SNRPA1P09661 255 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms