RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 CASP10Q92851 521 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 CXCL16Q9H2A7 254 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 ST6GALNAC4Q9H4F1 302 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 MRPL17Q9NRX2 175 aaKnown RBP14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 SEL1LQ9UBV2 794 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 PRKAG3Q9UGI9 489 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 CFAP45Q9UL16 551 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 PLXNA3P51805 1871 aa14.16□□□□□ -0.14
TMEM55B-206ENST00000556093 TCHHQ07283 1943 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 CLDN3O15551 220 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 KIF4AO95239 1232 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 GAP43P17677 238 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 NMT1P30419 496 aaKnown RBP14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 LIG4P49917 911 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 OSTNP61366 133 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 GTF2BQ00403 316 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 E2F4Q16254 413 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 XKR4Q5GH76 650 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 ANKRD54Q6NXT1 300 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 SHC4Q6S5L8 630 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 SFR1Q86XK3 245 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 MAP4K3Q8IVH8 894 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 HVCN1Q96D96 273 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 DNAJC19Q96DA6 116 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 ZBTB45Q96K62 511 aaPredicted RBP14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 ACAP3Q96P50 834 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 PAAF1Q9BRP4 392 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 EMILIN2Q9BXX0 1053 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 TNMDQ9H2S6 317 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 CUEDC2Q9H467 287 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 CNTN3Q9P232 1028 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 CACNG4Q9UBN1 327 aa14.15□□□□□ -0.14
TMEM55B-206ENST00000556093 ANK1P16157 1881 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 SMIM28A0A1B0GU29 152 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 TMEM189-UBE2V1I3L0A0 370 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 LILRB3O75022 631 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 HOXB8P17481 243 aaPredicted RBP14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 MATR3P43243 847 aaKnown RBP eCLIP14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 ME1P48163 572 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 DSG1Q02413 1049 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 ZP2Q05996 745 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 BECN1Q14457 450 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 KYAT1Q16773 422 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 USP41Q3LFD5 358 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 KIAA1841Q6NSI8 718 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 PPFIBP1Q86W92 1011 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 ADHFE1Q8IWW8 467 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 GPR65Q8IYL9 337 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 RABGGTAQ92696 567 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 UROC1Q96N76 676 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 POP1Q99575 1024 aaKnown RBP14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 PANK2Q9BZ23 570 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 GPR62Q9BZJ7 368 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 OLFML3Q9NRN5 406 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 CHST7Q9NS84 486 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 SLC38A7Q9NVC3 462 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 DZANK1Q9NVP4 752 aa14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 USP15Q9Y4E8 981 aaPredicted RBP14.14□□□□□ -0.15
TMEM55B-206ENST00000556093 DENND4AQ7Z401 1863 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 FRMD3A2A2Y4 597 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 C2CD2LO14523 706 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 TADA2AO75478 443 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 PPP1R37O75864 691 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 ADH1AP07327 375 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 CLTAP09496 248 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 CNPP09543 421 aaKnown RBP14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 IDEP14735 1019 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 KCNE1P15382 129 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 CREMQ03060 361 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 ELAVL2Q12926 359 aaKnown RBP14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 KIAA0319Q5VV43 1072 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 SYCE2Q6PIF2 218 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 TAS1R1Q7RTX1 841 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 GJD3Q8N144 294 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 HASPINQ8TF76 798 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 SLC22A17Q8WUG5 538 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 KLHL5Q96PQ7 755 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 LRRC27Q9C0I9 530 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 HAPLN2Q9GZV7 340 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 MAGEF1Q9HAY2 307 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 PCDHA7Q9UN72 937 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 ZDHHC9Q9Y397 364 aa14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 MTCL1Q9Y4B5 1905 aaKnown RBP14.13□□□□□ -0.15
TMEM55B-206ENST00000556093 A0A0B4J269 797 aa14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 MEFVO15553 781 aaPredicted RBP14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 FAM189A1O60320 539 aa14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 CXCL8P10145 99 aa14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 EPCAMP16422 314 aa14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 KLRC2P26717 231 aa14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 SSTR3P32745 418 aaPredicted RBP14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 CLCN4P51793 760 aa14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 SOX4Q06945 474 aaPredicted RBP14.12□□□□□ -0.15
TMEM55B-206ENST00000556093 SEZ6Q53EL9 994 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms