RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ZNF37AP17032 561 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-217ENST00000555953 CXCR5P32302 372 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 MPLP40238 635 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 SESN3P58005 492 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 RAP2BP61225 183 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 BLOC1S1P78537 153 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 FBXO42Q6P3S6 717 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 SLC44A3Q8N4M1 653 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 SIMC1Q8NDZ2 872 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 GPR156Q8NFN8 814 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 OR7D4Q8NG98 312 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 RAX2Q96IS3 184 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 IFT22Q9H7X7 185 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 ADARB2Q9NS39 739 aaKnown RBP5.73□□□□□ -1.49
SCFD1-217ENST00000555953 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 INSL6Q9Y581 213 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 SPATA31A6Q5VVP1 1343 aa5.73□□□□□ -1.49
SCFD1-217ENST00000555953 SNRPA1P09661 255 aaKnown RBP5.72□□□□□ -1.49
SCFD1-217ENST00000555953 CD38P28907 300 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 B3GNTL1Q67FW5 361 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-217ENST00000555953 ARMC6Q6NXE6 501 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 MED25Q71SY5 747 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 GPR149Q86SP6 731 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 RNF180Q86T96 592 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 MAPKAPK5Q8IW41 473 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 BCO1Q9HAY6 547 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
SCFD1-217ENST00000555953 ZEB2O60315 1214 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 ULK1O75385 1050 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 FOSP01100 380 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-217ENST00000555953 MXRA7P84157 204 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 MPP3Q13368 585 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 ADRM1Q16186 407 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 AFMIDQ63HM1 303 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 TMEM132CQ8N3T6 1108 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 FAM98AQ8NCA5 519 aaKnown RBP5.71□□□□□ -1.5
SCFD1-217ENST00000555953 TGFBRAP1Q8WUH2 860 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 TTC1Q99614 292 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 ZSWIM1Q9BR11 485 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 QRSL1Q9H0R6 528 aaKnown RBP5.71□□□□□ -1.5
SCFD1-217ENST00000555953 SCOCQ9UIL1 159 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 MAST3O60307 1309 aa5.71□□□□□ -1.5
SCFD1-217ENST00000555953 CCDC78A2IDD5 438 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 ENPP3O14638 875 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 FDXRP22570 491 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 ECHS1P30084 290 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 SREBF1P36956 1147 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 MRPS9P82933 396 aaKnown RBP5.7□□□□□ -1.5
SCFD1-217ENST00000555953 OCA2Q04671 838 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 STRN3Q13033 797 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 SP140Q13342 867 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 ERCC6LQ2NKX8 1250 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 MUM1Q2TAK8 710 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 RRP12Q5JTH9 1297 aaKnown RBP5.7□□□□□ -1.5
SCFD1-217ENST00000555953 ZKSCAN2Q63HK3 967 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 DDX46Q7L014 1031 aaKnown RBP5.7□□□□□ -1.5
SCFD1-217ENST00000555953 STRA8Q7Z7C7 330 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 HOXB13Q92826 284 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-217ENST00000555953 FUBP3Q96I24 572 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCFD1-217ENST00000555953 MRI1Q9BV20 369 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 ALOXE3Q9BYJ1 711 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 RSAD1Q9HA92 442 aa5.7□□□□□ -1.5
SCFD1-217ENST00000555953 APOBEC2Q9Y235 224 aaKnown RBP5.7□□□□□ -1.5
SCFD1-217ENST00000555953 A0A1B0GTW7 788 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 PPP3CAQ08209 521 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 DRC7Q8IY82 874 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 PQLC1Q8N2U9 271 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 UBR7Q8N806 425 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 BOLLQ8N9W6 283 aaKnown RBP5.69□□□□□ -1.5
SCFD1-217ENST00000555953 STON2Q8WXE9 905 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 Q96MF0 132 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 UHRF1Q96T88 793 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-217ENST00000555953 IFT122Q9HBG6 1241 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 DMRT3Q9NQL9 472 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
SCFD1-217ENST00000555953 SIK3Q9Y2K2 1263 aa5.69□□□□□ -1.5
SCFD1-217ENST00000555953 RAP2AP10114 183 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 FGFR4P22455 802 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 SLC6A2P23975 617 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 GUCY1A2P33402 732 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 ALDH1A3P47895 512 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 GYS2P54840 703 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 SPDYE7PQ495Y7 208 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 ZNF362Q5T0B9 420 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-217ENST00000555953 LRCH2Q5VUJ6 765 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 KCNK18Q7Z418 384 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 LMBR1Q8WVP7 490 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 SLC9A6Q92581 669 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 FUBP1Q96AE4 644 aaKnown RBP5.68□□□□□ -1.5
SCFD1-217ENST00000555953 RNF31Q96EP0 1072 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 ORAI2Q96SN7 254 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 LRFN3Q9BTN0 628 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 LDAHQ9H6V9 325 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 GREM2Q9H772 168 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 VTA1Q9NP79 307 aa5.68□□□□□ -1.5
SCFD1-217ENST00000555953 NOX1Q9Y5S8 564 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms