RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ATRNL1Q5VV63 1379 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 H3BML4 177 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 SLC16A6O15403 523 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 AP1G1O43747 822 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 PLATP00750 562 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 RPLP2P05387 115 aaKnown RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 RPS19P39019 145 aaKnown RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 CASRP41180 1078 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 GZMKP49863 264 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 FXR1P51114 621 aaKnown RBP eCLIP4.33□□□□□ -1.72
SRP54-209ENST00000555746 PER3P56645 1201 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 ATP8B2P98198 1209 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 SP140Q13342 867 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 MRPL49Q13405 166 aaKnown RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 HLTFQ14527 1009 aaKnown RBP eCLIP4.33□□□□□ -1.72
SRP54-209ENST00000555746 GBX1Q14549 363 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 TBC1D10BQ4KMP7 808 aaPredicted RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 PDZD4Q76G19 769 aaPredicted RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 ZNF572Q7Z3I7 529 aaPredicted RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 TTC7BQ86TV6 843 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 PQLC1Q8N2U9 271 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 BORCS6Q96GS4 357 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 MRGPRX4Q96LA9 322 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 TEPSINQ96N21 525 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 DMRTA2Q96SC8 542 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 PDCD2LQ9BRP1 358 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 SSBP3Q9BWW4 388 aaPredicted RBP4.33□□□□□ -1.72
SRP54-209ENST00000555746 PRDM11Q9NQV5 511 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 LANCL2Q9NS86 450 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 C1orf112Q9NSG2 853 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 PPP4R1LQ9P1A2 415 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 RCAN3Q9UKA8 241 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 PCDHB1Q9Y5F3 818 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 PCDHA13Q9Y5I0 950 aa4.33□□□□□ -1.72
SRP54-209ENST00000555746 TCOF1Q13428 1488 aaKnown RBP4.32□□□□□ -1.72
SRP54-209ENST00000555746 UBE2QL1A1L167 161 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 ADCY6O43306 1168 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 CDC14BO60729 498 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 AMY1AP04745 511 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 IL2RBP14784 551 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 IL12RB1P42701 662 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 FLT3LGP49771 235 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 NPEPPSP55786 919 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 APBA1Q02410 837 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 TARDBPQ13148 414 aaKnown RBP eCLIP4.32□□□□□ -1.72
SRP54-209ENST00000555746 MTM1Q13496 603 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 FAM47AQ5JRC9 791 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 PRAMEF14Q5SWL7 426 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 THEMIS2Q5TEJ8 643 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 TAX1BP1Q86VP1 789 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 DGKHQ86XP1 1220 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 RHOT1Q8IXI2 618 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 OR5M3Q8NGP4 307 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 KAT5Q92993 513 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 IL17RAQ96F46 866 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 CCDC136Q96JN2 1154 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 LRGUKQ96M69 825 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 FAM193BQ96PV7 902 aaPredicted RBP4.32□□□□□ -1.72
SRP54-209ENST00000555746 LRRC37BQ96QE4 947 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 PTPN18Q99952 460 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 TCF25Q9BQ70 676 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 PLA2G12BQ9BX93 195 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 C12orf65Q9H3J6 166 aaKnown RBP4.32□□□□□ -1.72
SRP54-209ENST00000555746 ZCCHC4Q9H5U6 513 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 TDP1Q9NUW8 608 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 OBP2AQ9NY56 170 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 SLC30A1Q9Y6M5 507 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 C3P01024 1663 aa4.32□□□□□ -1.72
SRP54-209ENST00000555746 ERICH3Q5RHP9 1530 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 CCDC88BA6NC98 1476 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 NEO1Q92859 1461 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 RAPGEF2Q9Y4G8 1499 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 CHD4Q14839 1912 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 MYBBP1AQ9BQG0 1328 aaKnown RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 A0A1W2PRX2 142 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 VSTM5A8MXK1 200 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 HOXA3O43365 443 aaPredicted RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 GPR32O75388 356 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 ALOX15P16050 662 aaPredicted RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 TBX4P57082 545 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 RAB39AQ14964 217 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 FAM111BQ6SJ93 734 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 DOK3Q7L591 496 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 DENND1CQ8IV53 801 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 DRC7Q8IY82 874 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 GRAMD1CQ8IYS0 662 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 ZGPATQ8N5A5 531 aaKnown RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 REPS2Q8NFH8 660 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 IFI44Q8TCB0 444 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 SAMD11Q96NU1 681 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 UHRF1Q96T88 793 aaPredicted RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 ACO2Q99798 780 aaKnown RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 SENP6Q9GZR1 1112 aaPredicted RBP4.31□□□□□ -1.72
SRP54-209ENST00000555746 KCNH6Q9H252 994 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 TMEM140Q9NV12 185 aa4.31□□□□□ -1.72
SRP54-209ENST00000555746 POLHQ9Y253 713 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms