RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 EFNA5P52803 228 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 PMS1P54277 932 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 NLRP11P59045 1033 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 MRPS6P82932 125 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 MGAT3Q09327 533 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 KNOP1Q1ED39 458 aaKnown RBP12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 CENPPQ6IPU0 288 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 EFHBQ8N7U6 833 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 NLRP7Q8WX94 980 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 P2RX5Q93086 422 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 ZNF668Q96K58 619 aaPredicted RBP12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 PPP1R16BQ96T49 567 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 TMEM134Q9H6X4 195 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 MINDY3Q9H8M7 445 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
MTHFD1-211ENST00000555709 TRIM49BA6NDI0 452 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 TGFB1I1O43294 461 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 UPP2O95045 317 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 PIGRP01833 764 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 ATF7P17544 494 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 CCNE1P24864 410 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 IQCB1Q15051 598 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 AMHR2Q16671 573 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 ADGRD2Q7Z7M1 963 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 DHX40Q8IX18 779 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 TMEM40Q8WWA1 233 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 SUSD6Q92537 303 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 ACCSQ96QU6 501 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 OSMRQ99650 979 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 OSBPL7Q9BZF2 842 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 NAT10Q9H0A0 1025 aaKnown RBP12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 FZD8Q9H461 694 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 TMEM206Q9H813 350 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 CBX8Q9HC52 389 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 TRPV2Q9Y5S1 764 aa12.83□□□□□ -0.36
MTHFD1-211ENST00000555709 K7ERI5 159 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 PDXKO00764 312 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 PRKCBP05771 671 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 CTSHP09668 335 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 DARSP14868 501 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 THPOP40225 353 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 CRYBB1P53674 252 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 NCAPHQ15003 741 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 FAM187BQ17R55 369 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 FAM26DQ5JW98 314 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 SLC39A4Q6P5W5 647 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 FIBCD1Q8N539 461 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 AOPEPQ8N6M6 819 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 ENOX1Q8TC92 643 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 CLP1Q92989 425 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 DUSP9Q99956 384 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 IFIH1Q9BYX4 1025 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 GCOM2Q9BZD3 368 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 GBP3Q9H0R5 595 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 RC3H2Q9HBD1 1191 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 TYW1Q9NV66 732 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 PRMT7Q9NVM4 692 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 BARX2Q9UMQ3 279 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 TRAF3IP3Q9Y228 551 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 CNTNAP2Q9UHC6 1331 aa12.82□□□□□ -0.36
MTHFD1-211ENST00000555709 BICDL2A1A5D9 508 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 TISP43B9A030 160 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 INO80B-WBP1J3KQ70 363 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 ACKR2O00590 384 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 IKBKBO14920 756 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 HNRNPDLO14979 420 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 CSPG5O95196 566 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 CHRNA1P02708 482 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 DNAJB1P25685 340 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 STX17P56962 302 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 MYL5Q02045 173 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 STRN3Q13033 797 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 NFIL3Q16649 462 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 MAPK6Q16659 721 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 EDRF1Q3B7T1 1238 aa12.81□□□□□ -0.36
MTHFD1-211ENST00000555709 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms