RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CHRNA1P02708 482 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 CLTAP09496 248 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 STAG3L1P0CL83 205 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 ACTN1P12814 892 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 HOXA11P31270 313 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 GTF2H1P32780 548 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 POLR2FP61218 127 aaKnown RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 MGAT3Q09327 533 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 BIRC3Q13489 604 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 FIGNQ5HY92 759 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 LMBRD2Q68DH5 695 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 KRT39Q6A163 491 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 SLC27A1Q6PCB7 646 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 FAM228AQ86W67 206 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 CEP120Q8N960 986 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 EHBP1Q8NDI1 1231 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 U2AF1L4Q8WU68 220 aaKnown RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 DHX38Q92620 1227 aaKnown RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 CCDC51Q96ER9 411 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 CCDC94Q9BW85 323 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 TRIM6Q9C030 488 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 SENP6Q9GZR1 1112 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 TMEM117Q9H0C3 514 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 TMEM8AQ9HCN3 771 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 NLRC4Q9NPP4 1024 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 AGPAT5Q9NUQ2 364 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 CEP72Q9P209 647 aa10.46□□□□□ -0.73
HNRNPC-220ENST00000555585 ANK1P16157 1881 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 SNPHO15079 494 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 EPHB6O15197 1021 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 TLR3O15455 904 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 PHACTR2O75167 634 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 CLSTN1O94985 981 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 IL18RAPO95256 599 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 CXCL8P10145 99 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 SKILP12757 684 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 GRM5P41594 1212 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 WNT7BP56706 349 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 MCCD1P59942 119 aaPredicted RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ZBED6P86452 979 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 APBA1Q02410 837 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ENOX2Q16206 610 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 TRIM71Q2Q1W2 868 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 EPC2Q52LR7 807 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ZNF618Q5T7W0 954 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 KLHDC7AQ5VTJ3 777 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 TRIM65Q6PJ69 517 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 RRAGAQ7L523 313 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 TMEM192Q8IY95 271 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 CCDC112Q8NEF3 446 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 OR8K1Q8NGG5 319 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ACAP3Q96P50 834 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 PANX2Q96RD6 677 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 BAG1Q99933 345 aaPredicted RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 EDEM3Q9BZQ6 932 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 TTYH3Q9C0H2 523 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 GANQ9H2C0 597 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 PLCB1Q9NQ66 1216 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ABHD10Q9NUJ1 306 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ST3GAL5Q9UNP4 418 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 ZKSCAN5Q9Y2L8 839 aa10.45□□□□□ -0.74
HNRNPC-220ENST00000555585 PTPRJQ12913 1337 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 MROH7Q68CQ1 1323 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 LACTBL1A8MY62 500 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 GPR182O15218 404 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 PMM2O15305 246 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 CAND2O75155 1236 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 NOL4O94818 638 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 TNNC2P02585 160 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 C4BPAP04003 597 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 TMEM191BP0C7N4 346 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 GHRP10912 638 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 CKBP12277 381 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 ZSCAN20P17040 1043 aaPredicted RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 PIK3CAP42336 1068 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 CDK7P50613 346 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 AP3M2P53677 418 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 YARSP54577 528 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 CLDN10P78369 228 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 CCZ1BP86790 482 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 CCZ1P86791 482 aaPredicted RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 TFAMQ00059 246 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 PAK2Q13177 524 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 FBXO47Q5MNV8 452 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 TWF2Q6IBS0 349 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 PDXDC1Q6P996 788 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 GJB7Q6PEY0 223 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 ZSCAN30Q86W11 494 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 WDR49Q8IV35 697 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 FBXL13Q8NEE6 735 aa10.44□□□□□ -0.74
HNRNPC-220ENST00000555585 ANKRD36BP1Q96IX9 119 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms