RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SPIRE2Q8WWL2 714 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 CALML4Q96GE6 196 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 MFSD14AQ96MC6 490 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 NTPCRQ9BSD7 190 aaKnown RBP15.16■□□□□ 0.02
PCNX4-209ENST00000555569 TARS2Q9BW92 718 aaKnown RBP15.16■□□□□ 0.02
PCNX4-209ENST00000555569 PTPRHQ9HD43 1115 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 KCND2Q9NZV8 630 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
PCNX4-209ENST00000555569 C1RP00736 705 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 RPL17P18621 184 aaKnown RBP15.15■□□□□ 0.02
PCNX4-209ENST00000555569 PDCP20941 246 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 UBA7P41226 1012 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 SMTNP53814 917 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
PCNX4-209ENST00000555569 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
PCNX4-209ENST00000555569 GLRA4Q5JXX5 417 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 RTP2Q5QGT7 225 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 CCDC149Q6ZUS6 474 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 PALB2Q86YC2 1186 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 ZDHHC14Q8IZN3 488 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 CEP120Q8N960 986 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 HDAC7Q8WUI4 952 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 PPP1R10Q96QC0 940 aaKnown RBP15.15■□□□□ 0.02
PCNX4-209ENST00000555569 TTPALQ9BTX7 342 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 BACH2Q9BYV9 841 aa15.15■□□□□ 0.02
PCNX4-209ENST00000555569 PDCD11Q14690 1871 aaKnown RBP15.14■□□□□ 0.01
PCNX4-209ENST00000555569 NPHP3-ACAD11A0A0J9YXS1 232 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 CCDC195A0A1B0GUA6 201 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 ABLIM1O14639 778 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 TGM5O43548 720 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 SPATA31D3P0C874 917 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 MYBP10242 640 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 MCF2P10911 925 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 PROZP22891 400 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 LONP1P36776 959 aaKnown RBP15.14■□□□□ 0.01
PCNX4-209ENST00000555569 OSTNP61366 133 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 STRN3Q13033 797 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
PCNX4-209ENST00000555569 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 FAM171A1Q5VUB5 890 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 PRSS55Q6UWB4 352 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-209ENST00000555569 CYP26C1Q6V0L0 522 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 SPATA31D4Q6ZUB0 917 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 CEP57Q86XR8 500 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 KREMEN2Q8NCW0 462 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 TMEM161BQ8NDZ6 487 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 PBXIP1Q96AQ6 731 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-209ENST00000555569 UROC1Q96N76 676 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 RHOBTB2Q9BYZ6 727 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 PLEKHA4Q9H4M7 779 aa15.14■□□□□ 0.01
PCNX4-209ENST00000555569 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-209ENST00000555569 DOCK8Q8NF50 2099 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 SMIM28A0A1B0GU29 152 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 TMEM189-UBE2V1I3L0A0 370 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 RFPL2O75678 378 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 BRD1O95696 1058 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
PCNX4-209ENST00000555569 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
PCNX4-209ENST00000555569 GRIN1Q05586 938 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 PSMD5Q16401 504 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 XKR4Q5GH76 650 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 LILRA6Q6PI73 481 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 DCLRE1AQ6PJP8 1040 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 ALKAL1Q6UXT8 129 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 OTOP3Q7RTS5 596 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 RASSF8Q8NHQ8 419 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 PIK3R5Q8WYR1 880 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 ZBTB45Q96K62 511 aaPredicted RBP15.13■□□□□ 0.01
PCNX4-209ENST00000555569 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 LARSQ9P2J5 1176 aaKnown RBP15.13■□□□□ 0.01
PCNX4-209ENST00000555569 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 ODF2LQ9ULJ1 636 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 SORCS3Q9UPU3 1222 aa15.13■□□□□ 0.01
PCNX4-209ENST00000555569 H0YCG3 227 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 TOM1L1O75674 476 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 B3GAT3O94766 335 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 PLCG1P19174 1290 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 CLCNKBP51801 687 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 MTMR3Q13615 1198 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
PCNX4-209ENST00000555569 NOLC1Q14978 699 aaKnown RBP eCLIP15.12■□□□□ 0.01
PCNX4-209ENST00000555569 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
PCNX4-209ENST00000555569 UPP1Q16831 310 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 PDXDC1Q6P996 788 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 ZPBP2Q6X784 338 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
PCNX4-209ENST00000555569 GPBP1Q86WP2 473 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 UBALD2Q8IYN6 164 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
PCNX4-209ENST00000555569 LRRC15Q8TF66 581 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 SMG7Q92540 1137 aaKnown RBP15.12■□□□□ 0.01
PCNX4-209ENST00000555569 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
PCNX4-209ENST00000555569 SNX27Q96L92 541 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms