RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 NTN1O95631 604 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 SNRPA1P09661 255 aaKnown RBP4.72□□□□□ -1.65
SRP54-207ENST00000555535 SLC9A1P19634 815 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 KELP23276 732 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 CD40P25942 277 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 FOLR3P41439 243 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 POLGP54098 1239 aaPredicted RBP4.72□□□□□ -1.65
SRP54-207ENST00000555535 CLRN1P58418 232 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 MGAT5Q09328 741 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 GRM1Q13255 1194 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 RSAD2Q8WXG1 361 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 B4GALT6Q9UBX8 382 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 PPP1R1BQ9UD71 204 aaPredicted RBP4.72□□□□□ -1.65
SRP54-207ENST00000555535 USP18Q9UMW8 372 aa4.72□□□□□ -1.65
SRP54-207ENST00000555535 PRR23D1E9PI22 279 aaPredicted RBP4.71□□□□□ -1.66
SRP54-207ENST00000555535 PFKMP08237 780 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 PRR35P0CG20 571 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 PRR23D2P0DMB1 279 aaPredicted RBP4.71□□□□□ -1.66
SRP54-207ENST00000555535 IGFALSP35858 605 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 EXOSC10Q01780 885 aaKnown RBP4.71□□□□□ -1.66
SRP54-207ENST00000555535 ZNF626Q68DY1 528 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 FOXR2Q6PJQ5 311 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 RTF1Q92541 710 aaKnown RBP4.71□□□□□ -1.66
SRP54-207ENST00000555535 PHACTR3Q96KR7 559 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 TANGO6Q9C0B7 1094 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 BHMT2Q9H2M3 363 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 TRIM39Q9HCM9 518 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 TOMM22Q9NS69 142 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 BTBD3Q9Y2F9 522 aa4.71□□□□□ -1.66
SRP54-207ENST00000555535 PRAMEF4O60810 478 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 ERN1O75460 977 aaKnown RBP4.7□□□□□ -1.66
SRP54-207ENST00000555535 GPANK1O95872 356 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 SNHG28P0DPA3 235 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 ATP2B1P20020 1258 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 CRHR1P34998 444 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 VAV2P52735 878 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 LRRC32Q14392 662 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 NBPF8Q3BBV2 869 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 FAM47AQ5JRC9 791 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 TECPR1Q7Z6L1 1165 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 DRC7Q8IY82 874 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 JMYQ8N9B5 988 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 SEMA6DQ8NFY4 1073 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 DENND1AQ8TEH3 1009 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 PAWRQ96IZ0 340 aaKnown RBP4.7□□□□□ -1.66
SRP54-207ENST00000555535 DEPDC7Q96QD5 511 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 DNAJC7Q99615 494 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 SNTG2Q9NY99 539 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 GPRC5DQ9NZD1 345 aa4.7□□□□□ -1.66
SRP54-207ENST00000555535 LINC01548A6NM66 108 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 GTF2F1P35269 517 aaKnown RBP eCLIP4.69□□□□□ -1.66
SRP54-207ENST00000555535 ETFDHQ16134 617 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 CYP2A13Q16696 494 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 KIAA0895LQ68EN5 471 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 ZSWIM2Q8NEG5 633 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 MDM1Q8TC05 714 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 SNX33Q8WV41 574 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 ARMC5Q96C12 935 aa4.69□□□□□ -1.66
SRP54-207ENST00000555535 ELL2O00472 640 aaPredicted RBP4.68□□□□□ -1.66
SRP54-207ENST00000555535 MPPED1O15442 326 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 FGFR4P22455 802 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 FLT3P36888 993 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 RBL2Q08999 1139 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 LAMB3Q13751 1172 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 RRP12Q5JTH9 1297 aaKnown RBP4.68□□□□□ -1.66
SRP54-207ENST00000555535 MED25Q71SY5 747 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 PASD1Q8IV76 773 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 CEP95Q96GE4 821 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 ZSWIM1Q9BR11 485 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 UNKLQ9H9P5 680 aaKnown RBP4.68□□□□□ -1.66
SRP54-207ENST00000555535 AOX1Q06278 1338 aa4.68□□□□□ -1.66
SRP54-207ENST00000555535 ASLP04424 464 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 GRIA3P42263 894 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 KLF9Q13886 244 aaPredicted RBP4.67□□□□□ -1.66
SRP54-207ENST00000555535 MFSD14BQ5SR56 506 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 TSTD2Q5T7W7 516 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 KAZNQ674X7 775 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 AWAT2Q6E213 333 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 SAMD14Q8IZD0 417 aaPredicted RBP4.67□□□□□ -1.66
SRP54-207ENST00000555535 SMRP1Q8NCR6 262 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 ZMAT4Q9H898 229 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 ANLNQ9NQW6 1124 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 ZNF112Q9UJU3 913 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 MTO1Q9Y2Z2 717 aaKnown RBP4.67□□□□□ -1.66
SRP54-207ENST00000555535 NUMBLQ9Y6R0 609 aa4.67□□□□□ -1.66
SRP54-207ENST00000555535 YY2O15391 372 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 GCSHP23434 173 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 CERS1P27544 350 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 MIDNQ504T8 468 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 PRAMEF14Q5SWL7 426 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 NEK8Q86SG6 692 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 ZNF480Q8WV37 535 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 NACC2Q96BF6 587 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 CLUHP3Q96NS8 147 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 FAM30AQ9NZY2 134 aa4.66□□□□□ -1.66
SRP54-207ENST00000555535 LRP12Q9Y561 859 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms