RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 RAB30Q15771 203 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 CLLU1OSQ5K130 101 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 TMEM192Q8IY95 271 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 CEP120Q8N960 986 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 PGBD4Q96DM1 585 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 CCDC51Q96ER9 411 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 CDT1Q9H211 546 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 SLC28A3Q9HAS3 691 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 OLFML3Q9NRN5 406 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 NFE2L3Q9Y4A8 694 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 KIAA1671Q9BY89 1806 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 PVALEFA0A1B0GWK0 134 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 EOMESO95936 686 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 POMCP01189 267 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 MYL1P05976 194 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 CDK11BP21127 795 aaKnown RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 MLH1P40692 756 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 AFF1P51825 1210 aaKnown RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 RNASELQ05823 741 aaKnown RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 STK4Q13043 487 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 TBX2Q13207 712 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 DCAF4L1Q3SXM0 396 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 SPATA1Q5VX52 437 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 CNNM4Q6P4Q7 775 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 GLB1LQ6UWU2 654 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 MPZL3Q6UWV2 235 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 AGMOQ6ZNB7 445 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 STXBP4Q6ZWJ1 553 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 Q7L0L9 218 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF598Q86UK7 904 aaKnown RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 MAP4K3Q8IVH8 894 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 SMYD4Q8IYR2 804 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-213ENST00000555386 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 FIBCD1Q8N539 461 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 SLC17A8Q8NDX2 589 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 POMGNT1Q8WZA1 660 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 ZFP42Q96MM3 310 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 GAD1Q99259 594 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 MSTO1Q9BUK6 570 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 HAPLN2Q9GZV7 340 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 PCIF1Q9H4Z3 704 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 RSAD1Q9HA92 442 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 RMND1Q9NWS8 449 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 EXOC7Q9UPT5 735 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 TNFSF13BQ9Y275 285 aa10.74□□□□□ -0.69
PSEN1-213ENST00000555386 LINC01553A4QN01 128 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 CLIC2O15247 247 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 TOM1L1O75674 476 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 RECQL4O94761 1208 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 PBX3P40426 434 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 HTRA4P83105 476 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 RBM10P98175 930 aaKnown RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 GLRA4Q5JXX5 417 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 ZBTB41Q5SVQ8 909 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 E4F1Q66K89 784 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 SPECC1LQ69YQ0 1117 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 SLC39A4Q6P5W5 647 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 ZPBP2Q6X784 338 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 APBB1IPQ7Z5R6 666 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 CRIPAKQ8N1N5 446 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 KIAA0895Q8NCT3 520 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 URGCPQ8TCY9 931 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 SCFD1Q8WVM8 642 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 ARNTL2Q8WYA1 636 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 ANKRD7Q92527 254 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 SAAL1Q96ER3 474 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 CASD1Q96PB1 797 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 C17orf80Q9BSJ5 609 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 CCDC94Q9BW85 323 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 CXCL16Q9H2A7 254 aa10.73□□□□□ -0.69
PSEN1-213ENST00000555386 ELAC1Q9H777 363 aaKnown RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 TYW1Q9NV66 732 aaKnown RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 MRPL42Q9Y6G3 142 aaKnown RBP10.73□□□□□ -0.69
PSEN1-213ENST00000555386 A0A1B0GTH6 734 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 GOLGA8IPA6NC78 632 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 GOLGA6L9A6NEM1 432 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ARL5CA6NH57 179 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 GOLGA8JA6NMD2 632 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 USP27XA6NNY8 438 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 RFXAPO00287 272 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ARHGAP6O43182 974 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ZSCAN12O43309 604 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 HOXA2O43364 376 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ZNF623O75123 536 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 PPP1R37O75864 691 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 MCF2P10911 925 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 CTNNB1P35222 781 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 HOXD13P35453 343 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 TNFSF9P41273 254 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ACOT2P49753 483 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 FXR1P51114 621 aaKnown RBP eCLIP10.72□□□□□ -0.69
PSEN1-213ENST00000555386 SCNN1GP51170 649 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 CYP2J2P51589 502 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 TAP1Q03518 808 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 SPAG1Q07617 926 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 ALCAMQ13740 583 aa10.72□□□□□ -0.69
PSEN1-213ENST00000555386 NOMO2Q5JPE7 1267 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms