RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PRAMEF14Q5SWL7 426 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 STRIP1Q5VSL9 837 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 RNF180Q86T96 592 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 CLRN3Q8NCR9 226 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 EAF2Q96CJ1 260 aaPredicted RBP6.99□□□□□ -1.29
VRK1-203ENST00000555067 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 PRKAB1Q9Y478 270 aa6.99□□□□□ -1.29
VRK1-203ENST00000555067 NEMP1O14524 444 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 PEX14O75381 377 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 NDUFA10O95299 355 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 MXRA7P84157 204 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 ARMC6Q6NXE6 501 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 DDX46Q7L014 1031 aaKnown RBP6.98□□□□□ -1.29
VRK1-203ENST00000555067 EXOC8Q8IYI6 725 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 LCORLQ8N3X6 602 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 CEP95Q96GE4 821 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 COQ10AQ96MF6 247 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 WDR11Q9BZH6 1224 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 PRDM13Q9H4Q3 707 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 ANKFY1Q9P2R3 1169 aa6.98□□□□□ -1.29
VRK1-203ENST00000555067 CCDC194A0A1B0GVG4 234 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 ZNF185O15231 689 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 BLOC1S1P78537 153 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 GUCY1B3Q02153 619 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 PDCD4Q53EL6 469 aaKnown RBP6.97□□□□□ -1.29
VRK1-203ENST00000555067 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 MFSD14BQ5SR56 506 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 GORABQ5T7V8 394 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 FAM102AQ5T9C2 384 aaPredicted RBP6.97□□□□□ -1.29
VRK1-203ENST00000555067 PAPD7Q5XG87 772 aaKnown RBP6.97□□□□□ -1.29
VRK1-203ENST00000555067 FAM180AQ6UWF9 173 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 THNSL2Q86YJ6 484 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 RNF169Q8NCN4 708 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
VRK1-203ENST00000555067 SLKQ9H2G2 1235 aaPredicted RBP6.97□□□□□ -1.29
VRK1-203ENST00000555067 DPP7Q9UHL4 492 aa6.97□□□□□ -1.29
VRK1-203ENST00000555067 S100BP04271 92 aaPredicted RBP6.96□□□□□ -1.3
VRK1-203ENST00000555067 SNRPA1P09661 255 aaKnown RBP6.96□□□□□ -1.3
VRK1-203ENST00000555067 DDX6P26196 483 aaKnown RBP eCLIP6.96□□□□□ -1.3
VRK1-203ENST00000555067 ID4P47928 161 aa6.96□□□□□ -1.3
VRK1-203ENST00000555067 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.3
VRK1-203ENST00000555067 AUTS2Q8WXX7 1259 aa6.96□□□□□ -1.3
VRK1-203ENST00000555067 GABBR1Q9UBS5 961 aa6.96□□□□□ -1.3
VRK1-203ENST00000555067 FPGT-TNNI3KV9GXZ4 949 aa6.96□□□□□ -1.3
VRK1-203ENST00000555067 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 KIAA0355O15063 1070 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 HKR1P10072 659 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 MTHFD2P13995 350 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 ITGB6P18564 788 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 GYS2P54840 703 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 CLRN1P58418 232 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 ATXN7L2Q5T6C5 722 aaPredicted RBP6.95□□□□□ -1.3
VRK1-203ENST00000555067 ZNF572Q7Z3I7 529 aaPredicted RBP6.95□□□□□ -1.3
VRK1-203ENST00000555067 OR7D4Q8NG98 312 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 R3HDMLQ9H3Y0 253 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 BCO1Q9HAY6 547 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 SYBUQ9NX95 663 aa6.95□□□□□ -1.3
VRK1-203ENST00000555067 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
VRK1-203ENST00000555067 COL11A2P13942 1736 aaPredicted RBP6.94□□□□□ -1.3
VRK1-203ENST00000555067 ADCY6O43306 1168 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 AKR1B10O60218 316 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 ERBB2P04626 1255 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 PDGFRBP09619 1106 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 ECHS1P30084 290 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 PTPN7P35236 360 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 SOX5P35711 763 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 CDK17Q00537 523 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 STRN3Q13033 797 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 SP140Q13342 867 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 ABHD17BQ5VST6 288 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 METRNLQ641Q3 311 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 FMNL3Q8IVF7 1028 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
VRK1-203ENST00000555067 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
VRK1-203ENST00000555067 GPR156Q8NFN8 814 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 RIN2Q8WYP3 895 aaPredicted RBP6.94□□□□□ -1.3
VRK1-203ENST00000555067 LINC00476Q8WZB0 136 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 EDARQ9UNE0 448 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 ATP11BQ9Y2G3 1177 aa6.94□□□□□ -1.3
VRK1-203ENST00000555067 PIPSLA2A3N6 862 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 CXorf49A8MYA2 514 aaPredicted RBP6.93□□□□□ -1.3
VRK1-203ENST00000555067 BRINP1O60477 761 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 AGAP9Q5VTM2 703 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 RHOT2Q8IXI1 618 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 DRC7Q8IY82 874 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 SLC35B2Q8TB61 432 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 ADAM2Q99965 735 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 PRDM16Q9HAZ2 1276 aa6.93□□□□□ -1.3
VRK1-203ENST00000555067 UNC119BA6NIH7 251 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 DRGXA6NNA5 263 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 CDK4P11802 303 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 ADSLP30566 484 aaPredicted RBP6.92□□□□□ -1.3
VRK1-203ENST00000555067 MASP1P48740 699 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 CHN2P52757 468 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 ADRM1Q16186 407 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 MUM1Q2TAK8 710 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms