RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GRID2IPA4D2P6 1211 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 GPR32O75388 356 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 GRIK4Q16099 956 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 DGKDQ16760 1214 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 EEF1DP3Q658K8 133 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 KIAA0319LQ8IZA0 1049 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 OR5B17Q8NGF7 314 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SOCS4Q8WXH5 440 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 LENG1Q96BZ8 264 aaPredicted RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 TLR10Q9BXR5 811 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ISCUQ9H1K1 167 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 TAS2R14Q9NYV8 317 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ENC1O14682 589 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 OGTO15294 1046 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SGPL1O95470 568 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SRGAP2CP0DJJ0 459 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 H2AFXP16104 143 aaPredicted RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 HADHBP55084 474 aaKnown RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 POU5F1Q01860 360 aaKnown RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 TFDP1Q14186 410 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 WHAMMP3Q1A5X7 153 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 MEI1Q5TIA1 1274 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ALKBH5Q6P6C2 394 aaKnown RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 WDR49Q8IV35 697 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 AGPAT1Q99943 283 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 CDT1Q9H211 546 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 PDZD7Q9H5P4 517 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SUGCTQ9HAC7 445 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SLC5A4Q9NY91 659 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SNX12Q9UMY4 172 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 JRKLQ9Y4A0 524 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 CYBAP13498 195 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 RGS2P41220 211 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ZNF132P52740 706 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 FMO1Q01740 532 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SREBF2Q12772 1141 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ELF2Q15723 593 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ENOX2Q16206 610 aaKnown RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 MAPK6Q16659 721 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 SEZ6Q53EL9 994 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 LMBRD2Q68DH5 695 aaPredicted RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 CREG2Q8IUH2 290 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ZBTB8OSQ8IWT0 167 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 EFCAB13Q8IY85 973 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 LMBR1Q8WVP7 490 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ELMO3Q96BJ8 720 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 UPF3AQ9H1J1 476 aaKnown RBP9.61□□□□□ -0.87
TDP1-210ENST00000554976 ZFYVE28Q9HCC9 887 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ABCB6Q9NP58 842 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 ANKFY1Q9P2R3 1169 aa9.61□□□□□ -0.87
TDP1-210ENST00000554976 CA12O43570 354 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 B4GALT4O60513 344 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 TSPAN1O60635 241 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 HLA-DRAP01903 254 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 TMEM253P0C7T8 217 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 ARHGAP44Q17R89 818 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 ERCC6LQ2NKX8 1250 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 ATF7IP2Q5U623 682 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 TLK2Q86UE8 772 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 GLYCTKQ8IVS8 523 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 TMEM192Q8IY95 271 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 PI4K2AQ9BTU6 479 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 CFHR5Q9BXR6 569 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 A0A087WZ62 844 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 GPR25O00155 361 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 PDE2AO00408 941 aaPredicted RBP9.6□□□□□ -0.87
TDP1-210ENST00000554976 CLDN3O15551 220 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 IPO7O95373 1038 aaKnown RBP9.6□□□□□ -0.87
TDP1-210ENST00000554976 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 DLATP10515 647 aaKnown RBP9.6□□□□□ -0.87
TDP1-210ENST00000554976 CYP2C19P33261 490 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 MFAP3P55082 362 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 CETN1Q12798 172 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 ENOSF1Q7L5Y1 443 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 USP37Q86T82 979 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 ZNF410Q86VK4 478 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 SLC47A2Q86VL8 602 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 TXLNBQ8N3L3 684 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
TDP1-210ENST00000554976 ARID3AQ99856 593 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 FDXACB1Q9BRP7 624 aaPredicted RBP9.6□□□□□ -0.87
TDP1-210ENST00000554976 PRMT7Q9NVM4 692 aaPredicted RBP9.6□□□□□ -0.87
TDP1-210ENST00000554976 UMODL1Q5DID0 1318 aa9.6□□□□□ -0.87
TDP1-210ENST00000554976 TSC2P49815 1807 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 SRGAP2O75044 1071 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 VTNP04004 478 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 GALCP54803 685 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 PPFIA1Q13136 1202 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 KIAA0753Q2KHM9 967 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 RUFY4Q6ZNE9 571 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 MSANTD4Q8NCY6 345 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 TPCN2Q8NHX9 752 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 NLRP4Q96MN2 994 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 NT5C1BQ96P26 610 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.59□□□□□ -0.87
TDP1-210ENST00000554976 ARHGAP39Q9C0H5 1083 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms