RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CDC25CP30307 473 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 LACTBP83111 547 aaPredicted RBP17.74■□□□□ 0.43
PCNX1-209ENST00000554879 SP2Q02086 613 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 C2orf54Q08AI8 447 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 SNX1Q13596 522 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 LAMC2Q13753 1193 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 CAPRIN2Q6IMN6 1127 aaKnown RBP17.74■□□□□ 0.43
PCNX1-209ENST00000554879 DCUN1D2Q6PH85 259 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 WDR59Q6PJI9 974 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 KIAA1586Q9HCI6 787 aa17.74■□□□□ 0.43
PCNX1-209ENST00000554879 ZNF185O15231 689 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 HBP1O60381 514 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 C6orf222P0C671 652 aaPredicted RBP17.73■□□□□ 0.43
PCNX1-209ENST00000554879 NSFP46459 744 aaKnown RBP17.73■□□□□ 0.43
PCNX1-209ENST00000554879 KIF22Q14807 665 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 DBN1Q16643 649 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 FIGNQ5HY92 759 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 SH3D19Q5HYK7 790 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 PARP2Q9UGN5 583 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 ECM29Q5VYK3 1845 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 FOXN3O00409 490 aaPredicted RBP17.73■□□□□ 0.43
PCNX1-209ENST00000554879 VTNP04004 478 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 GJB1P08034 283 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 ZCWPW2Q504Y3 356 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 CCDC97Q96F63 343 aaPredicted RBP17.73■□□□□ 0.43
PCNX1-209ENST00000554879 C17orf75Q9HAS0 396 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 CTNNA2P26232 953 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 KLRC1P26715 233 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 ABCD1P33897 745 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 EFNA5P52803 228 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 MXD4Q14582 209 aaPredicted RBP17.73■□□□□ 0.43
PCNX1-209ENST00000554879 ABHD15Q6UXT9 468 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 GTF3C2Q8WUA4 911 aaPredicted RBP17.73■□□□□ 0.43
PCNX1-209ENST00000554879 SENP7Q9BQF6 1050 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 RAB20Q9NX57 234 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 IER5Q5VY09 327 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 SYCE1Q8N0S2 351 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 PACSIN1Q9BY11 444 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 RPTORQ8N122 1335 aa17.73■□□□□ 0.43
PCNX1-209ENST00000554879 INSRRP14616 1297 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 POLE2P56282 527 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 MXRA7P84157 204 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 TNFAIP2Q03169 654 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 COBLL1Q53SF7 1204 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 LIN9Q5TKA1 542 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 DAW1Q8N136 415 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 TMEM161BQ8NDZ6 487 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 ASAP3Q8TDY4 903 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 SSU72P8A0A1W2PR75 194 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 TNNC1P63316 161 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 HIBCHQ6NVY1 386 aaPredicted RBP17.72■□□□□ 0.43
PCNX1-209ENST00000554879 APBB1IPQ7Z5R6 666 aaPredicted RBP17.72■□□□□ 0.43
PCNX1-209ENST00000554879 SPDYE1Q8NFV5 336 aaPredicted RBP17.72■□□□□ 0.43
PCNX1-209ENST00000554879 TAS1R2Q8TE23 839 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 BSNDQ8WZ55 320 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 C2orf40Q9H1Z8 148 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 RWDD2BP57060 319 aa17.72■□□□□ 0.43
PCNX1-209ENST00000554879 FARP2O94887 1054 aaPredicted RBP17.71■□□□□ 0.43
PCNX1-209ENST00000554879 FTLP02792 175 aaPredicted RBP17.71■□□□□ 0.43
PCNX1-209ENST00000554879 YARSP54577 528 aaKnown RBP17.71■□□□□ 0.43
PCNX1-209ENST00000554879 KAT2BQ92831 832 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 LRRC37AA6NMS7 1700 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 ANKRD62A6NC57 917 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 SLC8A1P32418 973 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 NLRP11P59045 1033 aaKnown RBP17.71■□□□□ 0.43
PCNX1-209ENST00000554879 CFAP58Q5T655 872 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 PCDHA2Q9Y5H9 948 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 NAMPTP43490 491 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 ATP8B4Q8TF62 1192 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 PLVAPQ9BX97 442 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 SMARCAL1Q9NZC9 954 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 TSKSQ9UJT2 592 aa17.71■□□□□ 0.43
PCNX1-209ENST00000554879 NEFHP12036 1026 aa17.71■□□□□ 0.42
PCNX1-209ENST00000554879 PPP3CAQ08209 521 aa17.71■□□□□ 0.42
PCNX1-209ENST00000554879 SLC30A5Q8TAD4 765 aa17.71■□□□□ 0.42
PCNX1-209ENST00000554879 H3BRB1 525 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 CCNHP51946 323 aaPredicted RBP17.7■□□□□ 0.42
PCNX1-209ENST00000554879 LAMTOR4Q0VGL1 99 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 CELF3Q5SZQ8 465 aaKnown RBP17.7■□□□□ 0.42
PCNX1-209ENST00000554879 SEL1L2Q5TEA6 688 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 UBL4BQ8N7F7 174 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 ZSWIM2Q8NEG5 633 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 TUT1Q9H6E5 874 aaKnown RBP17.7■□□□□ 0.42
PCNX1-209ENST00000554879 ZFYVE28Q9HCC9 887 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 NFASCO94856 1347 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 HLA-DRAP01903 254 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 PLCB3Q01970 1234 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 LRRC23Q53EV4 343 aaPredicted RBP17.7■□□□□ 0.42
PCNX1-209ENST00000554879 TRIM4Q9C037 500 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 STK38LQ9Y2H1 464 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 CAPN6Q9Y6Q1 641 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 GLRA2P23416 452 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 GPC3P51654 580 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 ZNF571Q7Z3V5 609 aaPredicted RBP17.7■□□□□ 0.42
PCNX1-209ENST00000554879 ETAA1Q9NY74 926 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
PCNX1-209ENST00000554879 GALCP54803 685 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms