RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 NDST4Q9H3R1 872 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 COL20A1Q9P218 1284 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 USP15Q9Y4E8 981 aaPredicted RBP12.08□□□□□ -0.48
SRP54-205ENST00000554803 CFAP47Q6ZTR5 3102 aa12.08□□□□□ -0.48
SRP54-205ENST00000554803 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 GCOM1H8Y6P7 765 aaPredicted RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 ATP1A1P05023 1023 aaKnown RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 ZNF200P98182 395 aaPredicted RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 CAMK1Q14012 370 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 DGKDQ16760 1214 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 HYIQ5T013 277 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 ANKRD40Q6AI12 368 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 NCAPH2Q6IBW4 605 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 DGLUCYQ7Z3D6 616 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 MCF2L2Q86YR7 1114 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 EFCAB13Q8IY85 973 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 FANCMQ8IYD8 2048 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 TBCKQ8TEA7 893 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 LARP4BQ92615 738 aaKnown RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 STAMQ92783 540 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 CLP1Q92989 425 aaKnown RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 RMDN1Q96DB5 314 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 TMEM60Q9H2L4 133 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 DEF6Q9H4E7 631 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 FAM204AQ9H8W3 233 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 JADE2Q9NQC1 790 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 CEP72Q9P209 647 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 LRWD1Q9UFC0 647 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 SIK3Q9Y2K2 1263 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 PCDHA13Q9Y5I0 950 aa12.07□□□□□ -0.48
SRP54-205ENST00000554803 BZW2Q9Y6E2 419 aaKnown RBP12.07□□□□□ -0.48
SRP54-205ENST00000554803 TRIM49BA6NDI0 452 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 AKR1B10O60218 316 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 CCNT1O60563 726 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 GLP2RO95838 553 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 F2P00734 622 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 CDC25AP30304 524 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 THPOP40225 353 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 MAGEA9P43362 315 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 TNNT3P45378 269 aaPredicted RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 KIF11P52732 1056 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 RPS6P62753 249 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 FKBP3Q00688 224 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 GHRHRQ02643 423 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 EHHADHQ08426 723 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 HIC1Q14526 733 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 MFSD10Q14728 455 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 CALCRLQ16602 461 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 LY6KQ17RY6 165 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 KIAA0753Q2KHM9 967 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 CFAP221Q4G0U5 840 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 DNAJC21Q5F1R6 531 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 CCDC181Q5TID7 509 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 EMC10Q5UCC4 262 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 IFT20Q8IY31 132 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 TMEM105Q8N8V8 129 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 CALR3Q96L12 384 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 CNTNAP3BQ96NU0 1288 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 MMS19Q96T76 1030 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 CNTNAP3Q9BZ76 1288 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 RC3H2Q9HBD1 1191 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
SRP54-205ENST00000554803 ADGRA3Q8IWK6 1321 aa12.06□□□□□ -0.48
SRP54-205ENST00000554803 WDR81Q562E7 1941 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 LRRIQ3A6PVS8 624 aaPredicted RBP12.05□□□□□ -0.48
SRP54-205ENST00000554803 MYO1CO00159 1063 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 CSPG5O95196 566 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 SERPING1P05155 500 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 PMS1P54277 932 aaKnown RBP12.05□□□□□ -0.48
SRP54-205ENST00000554803 AP3B2Q13367 1082 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 TMEM119Q4V9L6 283 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 MOXD1Q6UVY6 613 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 ADGRD2Q7Z7M1 963 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 CREG2Q8IUH2 290 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 MREGQ8N565 214 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 SAMD3Q8N6K7 520 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 SYTL5Q8TDW5 730 aaPredicted RBP12.05□□□□□ -0.48
SRP54-205ENST00000554803 SUSD6Q92537 303 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 RAD54LQ92698 747 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 TAAR1Q96RJ0 339 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 IWS1Q96ST2 819 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 RUFY1Q96T51 708 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 SH3GL2Q99962 352 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 PLVAPQ9BX97 442 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 MAP3K20Q9NYL2 800 aaKnown RBP12.05□□□□□ -0.48
SRP54-205ENST00000554803 STIM2Q9P246 746 aa12.05□□□□□ -0.48
SRP54-205ENST00000554803 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms