RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SGSM1Q2NKQ1 1148 aa18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 CCDC137Q6PK04 289 aaKnown RBP18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 MTHFD1LQ6UB35 978 aa18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 RPUSD2Q8IZ73 545 aaKnown RBP18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 BORCS6Q96GS4 357 aa18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 RBM17Q96I25 401 aaKnown RBP18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 AGPAT3Q9NRZ7 376 aa18.09■□□□□ 0.49
PPP4R3A-202ENST00000554390 BRAFP15056 766 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 SP100P23497 879 aaPredicted RBP18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 ALDH3A1P30838 453 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 PTDSS1P48651 473 aaKnown RBP18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 PPP3CAQ08209 521 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 CCDC15Q0P6D6 951 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 HP1BP3Q5SSJ5 553 aaPredicted RBP18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 RNF220Q5VTB9 566 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 PPP1R18Q6NYC8 613 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 INTS8Q75QN2 995 aaKnown RBP18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 CCDC127Q96BQ5 260 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 PCDHB18PQ96TA0 734 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 ZCWPW1Q9H0M4 648 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 LRMDAQ9H2I8 198 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 CDC42EP4Q9H3Q1 356 aaKnown RBP18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 DLGAP2Q9P1A6 1054 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 PCYOX1Q9UHG3 505 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 HAO1Q9UJM8 370 aa18.08■□□□□ 0.49
PPP4R3A-202ENST00000554390 ARP10275 920 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 RFC5P40937 340 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 MTFR1Q15390 333 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 ASAP3Q8TDY4 903 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 ZFAND2BQ8WV99 257 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 DNAJC9Q8WXX5 260 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 ERP27Q96DN0 273 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 WDR35Q9P2L0 1181 aa18.08■□□□□ 0.48
PPP4R3A-202ENST00000554390 MKRN3Q13064 507 aaKnown RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 FAM47EQ6ZV65 393 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 LONP2Q86WA8 852 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 SUPT20HQ8NEM7 779 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 ART4Q93070 314 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 MRRFQ96E11 262 aaKnown RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 SERPINB12Q96P63 405 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 APEX2Q9UBZ4 518 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 USP20Q9Y2K6 914 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 ACADSP16219 412 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 GJC1P36383 396 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 CRKP46108 304 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 LAMB3Q13751 1172 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 CMPK2Q5EBM0 449 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 APLFQ8IW19 511 aaPredicted RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 AGGF1Q8N302 714 aaeCLIP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 DRAXINQ8NBI3 349 aaPredicted RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 TTC8Q8TAM2 541 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 DHX38Q92620 1227 aaKnown RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 KIFC3Q9BVG8 833 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 TAOK3Q9H2K8 898 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 TDRD3Q9H7E2 651 aaKnown RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 METTL14Q9HCE5 456 aaKnown RBP18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 GPRC5CQ9NQ84 441 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 FRMD4BQ9Y2L6 1034 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 PLIN4Q96Q06 1357 aa18.07■□□□□ 0.48
PPP4R3A-202ENST00000554390 CYP26A1O43174 497 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 CYP3A4P08684 503 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 ACVR2BQ13705 512 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 TSNAXIP1Q2TAA8 658 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 SLC47A2Q86VL8 602 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 PPM1KQ8N3J5 372 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 ITFG2Q969R8 447 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 TEKT1Q969V4 418 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 PITPNM3Q9BZ71 974 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 PPEF1O14829 653 aaPredicted RBP18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 CLDN3O15551 220 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 EYA4O95677 639 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 CLUL1Q15846 466 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 HS2ST1Q7LGA3 356 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 CRYGNQ8WXF5 182 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 MAGEB18Q96M61 343 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 SPOPO43791 374 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 LMNB1P20700 586 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 ATP5DP30049 168 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 SETDB1Q15047 1291 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 ARMC3Q5W041 872 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 C1orf186Q6ZWK4 172 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 TRMT10CQ7L0Y3 403 aaKnown RBP18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 ENDOVQ8N8Q3 282 aaKnown RBP18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 FIZ1Q96SL8 496 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 FBXO28Q9NVF7 368 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 FAM198AQ9UFP1 575 aa18.06■□□□□ 0.48
PPP4R3A-202ENST00000554390 SYNGAP1Q96PV0 1343 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 A0A1B0GVG6 124 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 K7ENM7 598 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 CTNNA2P26232 953 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 POLE2P56282 527 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 TBC1D25Q3MII6 688 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 CAPN12Q6ZSI9 719 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 ZNF720Q7Z2F6 126 aa18.05■□□□□ 0.48
PPP4R3A-202ENST00000554390 PLEKHO2Q8TD55 490 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms