RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 FAM124AQ86V42 546 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 XYLT1Q86Y38 959 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 C3orf20Q8ND61 904 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 PJA1Q8NG27 643 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 RABGGTAQ92696 567 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 KCNH6Q9H252 994 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 TMEM60Q9H2L4 133 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 KMT5AQ9NQR1 393 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 DDX21Q9NR30 783 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHD8-207ENST00000554384 ABCF2Q9UG63 623 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 L1RE1Q9UN81 338 aa6.52□□□□□ -1.37
CHD8-207ENST00000554384 CDC14BO60729 498 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 ZBED1O96006 694 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 MYL3P08590 195 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 RAP2AP10114 183 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 ALOX15P16050 662 aaPredicted RBP6.51□□□□□ -1.37
CHD8-207ENST00000554384 AGFG1P52594 562 aaKnown RBP6.51□□□□□ -1.37
CHD8-207ENST00000554384 NPEPPSP55786 919 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 RHBDL3P58872 404 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 PPP2CBP62714 309 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 PPP2CAP67775 309 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 NKX6-1P78426 367 aaPredicted RBP6.51□□□□□ -1.37
CHD8-207ENST00000554384 PURAQ00577 322 aaKnown RBP6.51□□□□□ -1.37
CHD8-207ENST00000554384 PLS1Q14651 629 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 GAGE13Q4V321 117 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 GADL1Q6ZQY3 521 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 ARHGEF18Q6ZSZ5 1173 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 ZNF572Q7Z3I7 529 aaPredicted RBP6.51□□□□□ -1.37
CHD8-207ENST00000554384 DAAM2Q86T65 1068 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 PARD3BQ8TEW8 1205 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 LMF1Q96S06 567 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 FAM204AQ9H8W3 233 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 LMBRD1Q9NUN5 540 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 USP40Q9NVE5 1235 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 SLC23A1Q9UHI7 598 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 RAPGEFL1Q9UHV5 662 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 PCDHA1Q9Y5I3 950 aa6.51□□□□□ -1.37
CHD8-207ENST00000554384 A0A1W2PRX2 142 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 PMM2O15305 246 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 CR2P20023 1033 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 CNR2P34972 360 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 MRPL49Q13405 166 aaKnown RBP6.5□□□□□ -1.37
CHD8-207ENST00000554384 UBE4AQ14139 1066 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 HLTFQ14527 1009 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHD8-207ENST00000554384 CNN3Q15417 329 aaKnown RBP6.5□□□□□ -1.37
CHD8-207ENST00000554384 ANO6Q4KMQ2 910 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 BORAQ6PGQ7 559 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 TAX1BP1Q86VP1 789 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 LGI4Q8N135 537 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 CYFIP2Q96F07 1278 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 SLC39A13Q96H72 371 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 PLA2G12BQ9BX93 195 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 EPC1Q9H2F5 836 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 ZMAT3Q9HA38 289 aaKnown RBP6.5□□□□□ -1.37
CHD8-207ENST00000554384 ATP6V0A4Q9HBG4 840 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 TMEM140Q9NV12 185 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 CPA4Q9UI42 421 aa6.5□□□□□ -1.37
CHD8-207ENST00000554384 TCRBV7S2A1N4TA0A589 114 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 NT5C1B-RDH14C9J2C7 533 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 FAM227AF5H4B4 570 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 HOXA3O43365 443 aaPredicted RBP6.49□□□□□ -1.37
CHD8-207ENST00000554384 RPLP2P05387 115 aaKnown RBP6.49□□□□□ -1.37
CHD8-207ENST00000554384 TYRP14679 529 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 SMARCA1P28370 1054 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 GZMKP49863 264 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 RAB1AP62820 205 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 SAFBQ15424 915 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHD8-207ENST00000554384 CSRP2Q16527 193 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 FLYWCH1Q4VC44 716 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 RNF220Q5VTB9 566 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 PMM1Q92871 262 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 SLC35A4Q96G79 324 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 CDK5RAP3Q96JB5 506 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 C20orf173Q96LM9 149 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 TCF25Q9BQ70 676 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 C1orf43Q9BWL3 253 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 NAA15Q9BXJ9 866 aaKnown RBP6.49□□□□□ -1.37
CHD8-207ENST00000554384 MEGF9Q9H1U4 602 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 USP25Q9UHP3 1055 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 PCDHA6Q9UN73 950 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 POLHQ9Y253 713 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 PNPLA7Q6ZV29 1317 aa6.49□□□□□ -1.37
CHD8-207ENST00000554384 A0A088AWK7 358 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 CFAP69A5D8W1 941 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 CAPN8A6NHC0 703 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 CXorf49A8MYA2 514 aaPredicted RBP6.48□□□□□ -1.37
CHD8-207ENST00000554384 F2RL2O00254 374 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 NRP1O14786 923 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 SLC16A6O15403 523 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 PQBP1O60828 265 aaKnown RBP6.48□□□□□ -1.37
CHD8-207ENST00000554384 AHSGP02765 367 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 NBPF7P0C2Y1 421 aaPredicted RBP6.48□□□□□ -1.37
CHD8-207ENST00000554384 SLC5A1P13866 664 aa6.48□□□□□ -1.37
CHD8-207ENST00000554384 IL2RBP14784 551 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms