RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 DNAJC17Q9NVM6 304 aaKnown RBP15.6■□□□□ 0.09
ACTN1-211ENST00000553882 PCDHA10Q9Y5I2 948 aa15.6■□□□□ 0.09
ACTN1-211ENST00000553882 SRRM3A6NNA2 597 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 PAEPP09466 180 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 DPEP1P16444 411 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 MAPK4P31152 587 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 FNTAP49354 379 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 SNRPFP62306 86 aaKnown RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 MAP3K10Q02779 954 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 TRIP13Q15645 432 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 SPDYCQ5MJ68 293 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 ACAD10Q6JQN1 1059 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 SWSAP1Q6NVH7 229 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 KCNV1Q6PIU1 500 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 C6orf89Q6UWU4 347 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 YTHDF3Q7Z739 585 aaKnown RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 AGBL3Q8NEM8 1001 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 KIFAP3Q92845 792 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 RNF146Q9NTX7 359 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 UVRAGQ9P2Y5 699 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 SEPT9Q9UHD8 586 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 PASKQ96RG2 1323 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 ECEL1O95672 775 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 GGPS1O95749 300 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 HNRNPH1P31943 449 aaKnown RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 GHRHRQ02643 423 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 EN1Q05925 392 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 SGO2Q562F6 1265 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 CCDC121Q6ZUS5 278 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 XPO6Q96QU8 1125 aaKnown RBP15.59■□□□□ 0.09
ACTN1-211ENST00000553882 EFCC1Q9HA90 598 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 FZD1Q9UP38 647 aa15.59■□□□□ 0.09
ACTN1-211ENST00000553882 VWA5AO00534 786 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 RIPK2O43353 540 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 ZBED4O75132 1171 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 FSBPO95073 299 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 ACSL3O95573 720 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 NR3C2P08235 984 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 RRM1P23921 792 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CYP1B1Q16678 543 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 SPOPLQ6IQ16 392 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 MMS22LQ6ZRQ5 1243 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CYFIP1Q7L576 1253 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CCDC13Q8IYE1 715 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 MTMR14Q8NCE2 650 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 MORC4Q8TE76 937 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 PSPC1Q8WXF1 523 aaKnown RBP15.58■□□□□ 0.08
ACTN1-211ENST00000553882 MFSD14AQ96MC6 490 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 TEPSINQ96N21 525 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 FAM118BQ9BPY3 351 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 DDX23Q9BUQ8 820 aaKnown RBP15.58■□□□□ 0.08
ACTN1-211ENST00000553882 OSBPL7Q9BZF2 842 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 ADAM7Q9H2U9 754 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CNOT10Q9H9A5 744 aaKnown RBP15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CHST7Q9NS84 486 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 PARP2Q9UGN5 583 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 GOLGA6L7A0A1B0GV03 622 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 SCP2P22307 547 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 VPS41P49754 854 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CDR1P51861 262 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 KRT17Q04695 432 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CALCOCO2Q13137 446 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CLEC16AQ2KHT3 1053 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 ERMARDQ5T6L9 678 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 PASD1Q8IV76 773 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 CACNA2D3Q8IZS8 1091 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 GPD1LQ8N335 351 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 SLC17A8Q8NDX2 589 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 PGM2Q96G03 612 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 FBXL18Q96ME1 805 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 HERPUD2Q9BSE4 406 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 TAOK3Q9H2K8 898 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 ASIC3Q9UHC3 531 aa15.58■□□□□ 0.08
ACTN1-211ENST00000553882 IFNAR2P48551 515 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 ACOT2P49753 483 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 WNT7BP56706 349 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 GKAP1Q5VSY0 366 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-211ENST00000553882 OTUD6AQ7L8S5 288 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 CCDC60Q8IWA6 550 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-211ENST00000553882 TMC2Q8TDI7 906 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 ZNF516Q92618 1163 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 ART4Q93070 314 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 CHMP6Q96FZ7 201 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 ZBED3Q96IU2 234 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-211ENST00000553882 XPNPEP1Q9NQW7 623 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 C1orf112Q9NSG2 853 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 O00370 1275 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 TNNI1P19237 187 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 KCNA3P22001 575 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 LONRF1Q17RB8 773 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 ICE2Q659A1 982 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 TAS1R3Q7RTX0 852 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 VSIG10LQ86VR7 867 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 HEMGNQ9BXL5 484 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 FAM129AQ9BZQ8 928 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 MTFR1LQ9H019 292 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 DOCK5Q9H7D0 1870 aa15.57■□□□□ 0.08
ACTN1-211ENST00000553882 RASGRF2O14827 1237 aa15.56■□□□□ 0.08
ACTN1-211ENST00000553882 RGS20O76081 388 aa15.56■□□□□ 0.08
ACTN1-211ENST00000553882 CFHP08603 1231 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms