RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TREHO43280 583 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 PRPF6O94906 941 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 LMNAP02545 664 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 TPM2P07951 284 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 INSRRP14616 1297 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 ZNF18P17022 549 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 RPL13P26373 211 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 TMOD1P28289 359 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 ARL2P36404 184 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 NAMPTP43490 491 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 NPTX2P47972 431 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 CASP5P51878 434 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 SNRPFP62306 86 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 FKBP3Q00688 224 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 PPFIA1Q13136 1202 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 MXD4Q14582 209 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 ANGPT1Q15389 498 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 OTOGLQ3ZCN5 2332 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 WDR81Q562E7 1941 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 CWF19L1Q69YN2 538 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 HS2ST1Q7LGA3 356 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 HAUS6Q7Z4H7 955 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 DCLK2Q8N568 766 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 KLHL23Q8NBE8 558 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 GLIS3Q8NEA6 775 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 FLCNQ8NFG4 579 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 PSPC1Q8WXF1 523 aaKnown RBP15.81■□□□□ 0.12
SHMT2-208ENST00000553868 CEP63Q96MT8 703 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 FIZ1Q96SL8 496 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 PLVAPQ9BX97 442 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 MFSD1Q9H3U5 465 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 RNPEPQ9H4A4 650 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 TLE6Q9H808 572 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 PLXNA4Q9HCM2 1894 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 POLD4Q9HCU8 107 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 SORCS3Q9UPU3 1222 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 R4GN57 208 aa15.81■□□□□ 0.12
SHMT2-208ENST00000553868 IGKV6-21A0A0C4DH24 114 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 TRIM49BA6NDI0 452 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 PPP1R37O75864 691 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 ADCY5O95622 1261 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 GNA14O95837 355 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 ASGR2P07307 311 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 EEF1GP26641 437 aaKnown RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 PMS1P54277 932 aaKnown RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 GTF2BQ00403 316 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 FANCCQ00597 558 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 TFDP1Q14186 410 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 RSPO4Q2I0M5 234 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 FILIP1LQ4L180 1135 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 ZCWPW2Q504Y3 356 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 UBALD2Q8IYN6 164 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 SYCP3Q8IZU3 236 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 DEPTORQ8TB45 409 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 ZNF689Q96CS4 500 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 DUSP9Q99956 384 aaKnown RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 HINFPQ9BQA5 517 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 STRA6Q9BX79 667 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 SRRTQ9BXP5 876 aaKnown RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 FGFBP2Q9BYJ0 223 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 S1PR5Q9H228 398 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 KCTD10Q9H3F6 313 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 SAMSN1Q9NSI8 373 aaKnown RBP15.8■□□□□ 0.12
SHMT2-208ENST00000553868 TRAF3IP3Q9Y228 551 aa15.8■□□□□ 0.12
SHMT2-208ENST00000553868 PKD1L2Q7Z442 2459 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 NRCAMQ92823 1304 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 ZBTB42B2RXF5 422 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 CETN3O15182 167 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 SLC16A4O15374 487 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 C22orf31O95567 290 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 GNAT1P11488 350 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 CLCN5P51795 746 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 ZNF75DP51815 510 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 GRIK4Q16099 956 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 NFIL3Q16649 462 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-208ENST00000553868 TMEM161BQ8NDZ6 487 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 KCNN1Q92952 543 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 GBP3Q9H0R5 595 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 HSD3B7Q9H2F3 369 aa15.79■□□□□ 0.12
SHMT2-208ENST00000553868 DENND3A2RUS2 1198 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 KCNJ18B7U540 433 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 C2CD4DB7Z1M9 353 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 ATP1A3P13637 1013 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 GLRA2P23416 452 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 KLRC1P26715 233 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 EFNA5P52803 228 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 UBASH3AP57075 661 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 IGBP1P78318 339 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 STRN3Q13033 797 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 MYBPC2Q14324 1141 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 KCNJ12Q14500 433 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 HSP90AA2PQ14568 343 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-208ENST00000553868 PAN2Q504Q3 1202 aaKnown RBP15.78■□□□□ 0.12
SHMT2-208ENST00000553868 ZC2HC1CQ53FD0 456 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-208ENST00000553868 TCP11X2Q5H9J9 407 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
SHMT2-208ENST00000553868 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms