RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 NAB2Q15742 525 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 IL17AQ16552 155 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 HYIQ5T013 277 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 PALB2Q86YC2 1186 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 RABGGTAQ92696 567 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 UROC1Q96N76 676 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 MMTAG2Q9BU76 263 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 CCDC94Q9BW85 323 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 POLD4Q9HCU8 107 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 ARHGAP28Q9P2N2 729 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 USP20Q9Y2K6 914 aa16.62■□□□□ 0.25
SDR39U1-205ENST00000553546 TMEM189-UBE2V1I3L0A0 370 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 SLC26A4O43511 780 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 ASGR2P07307 311 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 CDC25AP30304 524 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 GRM5P41594 1212 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 NUBP1P53384 320 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 FOXK2Q01167 660 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 FAM171A1Q5VUB5 890 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 LILRA6Q6PI73 481 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 C1orf186Q6ZWK4 172 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 DAW1Q8N136 415 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 ACO2Q99798 780 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 RUSC1Q9BVN2 902 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 PIDD1Q9HB75 910 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 IGSF9Q9P2J2 1179 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 CLUHO75153 1309 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 VPS13AQ96RL7 3174 aa16.61■□□□□ 0.25
SDR39U1-205ENST00000553546 MYH11P35749 1972 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 RFPL2O75678 378 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 BMP15O95972 392 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 SMTNP53814 917 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 MAPK7Q13164 816 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 ZRSR1Q15695 479 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 PSMD5Q16401 504 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 PRSS55Q6UWB4 352 aaPredicted RBP16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 KCNK18Q7Z418 384 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 GLYCTKQ8IVS8 523 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 SPIRE2Q8WWL2 714 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 AK8Q96MA6 479 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 TBC1D32Q96NH3 1257 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 PPP1R10Q96QC0 940 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 CDT1Q9H211 546 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 TRIP11Q15643 1979 aa16.6■□□□□ 0.25
SDR39U1-205ENST00000553546 DMDP11532 3685 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 TRAPPC3O43617 180 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 ZMYND10O75800 440 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 B3GAT3O94766 335 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 SPATA31D3P0C874 917 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 MCF2P10911 925 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 RPL17P18621 184 aaKnown RBP16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 AVPR2P30518 371 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 STRN3Q13033 797 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 TDGQ13569 410 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 GLRA4Q5JXX5 417 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 SPATA31D4Q6ZUB0 917 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 LNX1Q8TBB1 728 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 FEZF2Q8TBJ5 459 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 ZNF707Q96C28 371 aaPredicted RBP16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 PRKD2Q9BZL6 878 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 PTPRHQ9HD43 1115 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 FBXW11Q9UKB1 542 aa16.59■□□□□ 0.25
SDR39U1-205ENST00000553546 CITO14578 2027 aa16.58■□□□□ 0.25
SDR39U1-205ENST00000553546 H0YCG3 227 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 SLC16A4O15374 487 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 HNRNPA1P09651 372 aaKnown RBP eCLIP16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 PLS3P13797 630 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 XKR4Q5GH76 650 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 MPZL3Q6UWV2 235 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 TAS1R3Q7RTX0 852 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 BRAPQ7Z569 592 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 NXPE3Q969Y0 559 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 DDX27Q96GQ7 796 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 PNMA5Q96PV4 448 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 CLSTN3Q9BQT9 956 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms