RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 BMS1Q14692 1282 aaKnown RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 SKIV2LQ15477 1246 aaKnown RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 CTC1Q2NKJ3 1217 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 RNF168Q8IYW5 571 aaPredicted RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 ATXN2LQ8WWM7 1075 aaKnown RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 HLA-CQ95604 372 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 PABPC5Q96DU9 382 aaKnown RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 CDCA3Q99618 268 aaPredicted RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 COLEC11Q9BWP8 271 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 VN1R3Q9BXE9 311 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 FGFBP2Q9BYJ0 223 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 CXCL16Q9H2A7 254 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 TMEM206Q9H813 350 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 PRDM6Q9NQX0 595 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 ENTPD7Q9NQZ7 604 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 SLC38A7Q9NVC3 462 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 CHMP5Q9NZZ3 219 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 TBC1D7Q9P0N9 293 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 PRG3Q9Y2Y8 225 aaPredicted RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 IRAK3Q9Y616 596 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 UBE4BO95155 1302 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.14■□□□□ 0.81
CPSF2-202ENST00000553427 SMIM28A0A1B0GU29 152 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 MEFVO15553 781 aaPredicted RBP20.14■□□□□ 0.81
CPSF2-202ENST00000553427 ADRB2P07550 413 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 CTSAP10619 480 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 MATR3P43243 847 aaKnown RBP eCLIP20.14■□□□□ 0.81
CPSF2-202ENST00000553427 AFMP43652 599 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 OSTNP61366 133 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 CUL4BQ13620 913 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 SMC1AQ14683 1233 aaKnown RBP20.14■□□□□ 0.81
CPSF2-202ENST00000553427 POSTNQ15063 836 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 SLC10A6Q3KNW5 377 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 FAM26FQ5R3K3 315 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 EPM2AIP1Q7L775 607 aaPredicted RBP20.14■□□□□ 0.81
CPSF2-202ENST00000553427 TMC7Q7Z402 723 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 UROC1Q96N76 676 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 TSPAN18Q96SJ8 248 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 MSTO1Q9BUK6 570 aa20.14■□□□□ 0.81
CPSF2-202ENST00000553427 UBE2ZQ9H832 354 aaPredicted RBP20.14■□□□□ 0.81
CPSF2-202ENST00000553427 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 TTC26A0AVF1 554 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 ANKRD63C9JTQ0 380 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 TMEM189-UBE2V1I3L0A0 370 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 KCNA1Q09470 495 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 HSP90AA2PQ14568 343 aaPredicted RBP20.13■□□□□ 0.81
CPSF2-202ENST00000553427 PLPP4Q5VZY2 271 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 ADGRD2Q7Z7M1 963 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 GPR65Q8IYL9 337 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 VPS52Q8N1B4 723 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 EFHBQ8N7U6 833 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 MRPL43Q8N983 215 aaKnown RBP20.13■□□□□ 0.81
CPSF2-202ENST00000553427 MICAL1Q8TDZ2 1067 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 HERC2P3Q9BVR0 1158 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 BLZF1Q9H2G9 400 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 PCDHGC5Q9Y5F6 944 aa20.13■□□□□ 0.81
CPSF2-202ENST00000553427 C2orf71A6NGG8 1288 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 KLRC4O43908 158 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 SOD2P04179 222 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 CXCL8P10145 99 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 GARTP22102 1010 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 CASP1P29466 404 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 ADSSP30520 456 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 ENOX2Q16206 610 aaKnown RBP20.12■□□□□ 0.81
CPSF2-202ENST00000553427 DUSP6Q16828 381 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 AAK1Q2M2I8 961 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 GLRA4Q5JXX5 417 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 KRBA2Q6ZNG9 492 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 GRAMD1CQ8IYS0 662 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 ZMAT2Q96NC0 199 aaKnown RBP20.12■□□□□ 0.81
CPSF2-202ENST00000553427 TLE6Q9H808 572 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 CPSF3Q9UKF6 684 aaKnown RBP20.12■□□□□ 0.81
CPSF2-202ENST00000553427 ADAM28Q9UKQ2 775 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 CITO14578 2027 aa20.12■□□□□ 0.81
CPSF2-202ENST00000553427 SF3B1O75533 1304 aaKnown RBP eCLIP20.11■□□□□ 0.81
CPSF2-202ENST00000553427 GOLGA6L4A6NEF3 574 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 CASTOR2A6NHX0 329 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 TISP43B9A030 160 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 ZNF202O95125 648 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 CSPG5O95196 566 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 BMT2Q1RMZ1 405 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 SEZ6Q53EL9 994 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 ZBTB41Q5SVQ8 909 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 CD302Q8IX05 232 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 ZNF507Q8TCN5 953 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 HPS3Q969F9 1004 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 DDX27Q96GQ7 796 aaKnown RBP20.11■□□□□ 0.81
CPSF2-202ENST00000553427 CCDC34Q96HJ3 373 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 PAAF1Q9BRP4 392 aa20.11■□□□□ 0.81
CPSF2-202ENST00000553427 AGO2Q9UKV8 859 aaKnown RBP20.11■□□□□ 0.81
CPSF2-202ENST00000553427 HIDE1A8MVS5 230 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 F8W810 466 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 KIAA0391O15091 583 aaKnown RBP20.1■□□□□ 0.81
CPSF2-202ENST00000553427 PRPF6O94906 941 aaKnown RBP20.1■□□□□ 0.81
CPSF2-202ENST00000553427 KIF4AO95239 1232 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 TNFSF9P41273 254 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 NRIP1P48552 1158 aa20.1■□□□□ 0.81
CPSF2-202ENST00000553427 MRPS5P82675 430 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms