RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 GALCP54803 685 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 OCA2Q04671 838 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 KRT33BQ14525 404 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SPATA21Q7Z572 469 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 OLFM3Q96PB7 478 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 TRIM45Q9H8W5 580 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-208ENST00000553289 SNX5Q9Y5X3 404 aa12.19□□□□□ -0.46
SYNE2-208ENST00000553289 C19orf81C9J6K1 198 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 E5RI56 91 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ANP32DO95626 131 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 DDX5P17844 614 aaKnown RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 NNMTP40261 264 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 RFC5P40937 340 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ACTR2P61160 394 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 SGSM1Q2NKQ1 1148 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 XRRA1Q6P2D8 792 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ZNF677Q86XU0 584 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 HIPK4Q8NE63 616 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 KRT35Q92764 455 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ING2Q9H160 280 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 INPP5FQ9Y2H2 1132 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 H0Y3Z8 333 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 MAFGO15525 162 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ASAP3Q8TDY4 903 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 FAM161BQ96MY7 647 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 RIT2Q99578 217 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 TRIM54Q9BYV2 358 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ROPN1BQ9BZX4 212 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 KCNF1Q9H3M0 494 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 TRABDQ9H4I3 376 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 SMYD3Q9H7B4 428 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ROPN1Q9HAT0 212 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 RBP5P82980 135 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 LAMB3Q13751 1172 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 COG2Q14746 738 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 CCNI2Q6ZMN8 369 aaPredicted RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 RGS9BPQ6ZS82 235 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 EFHBQ8N7U6 833 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 CHP1Q99653 195 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 DDX50Q9BQ39 737 aaKnown RBP12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ASPSCR1Q9BZE9 553 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 NEXMIFQ5QGS0 1516 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 RALAP11233 206 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ADORA2BP29275 332 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 UGP2Q16851 508 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 BTBD8Q5XKL5 378 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 C4orf22Q6V702 233 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 TC2NQ8N9U0 490 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 RAPGEF5Q92565 580 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 TEX13BQ9BXU2 312 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 ZFATQ9P243 1243 aa12.18□□□□□ -0.46
SYNE2-208ENST00000553289 KITP10721 976 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 POU5F1BQ06416 359 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 P3H1Q32P28 736 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RIBC1Q8N443 379 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RNF149Q8NC42 400 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 YY1AP1Q9H869 796 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 ARHGAP10A1A4S6 786 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RAD51Q06609 339 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RARS2Q5T160 578 aaKnown RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 DAGLBQ8NCG7 672 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 POLD4Q9HCU8 107 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MYMKA6NI61 221 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 NDUFB10O96000 172 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 E2F4Q16254 413 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 ANGPTL8Q6UXH0 198 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RNF103-CHMP3A0A140T963 221 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 CCDC195A0A1B0GUA6 201 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MYO1DO94832 1006 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 IL18RAPO95256 599 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 ANTXR2P58335 489 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 SNRNP35Q16560 246 aaKnown RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 ICA1LQ8NDH6 482 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MAGEB2O15479 319 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 BNIP3LO60238 219 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 NME3Q13232 169 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 DYNC1I2Q13409 638 aaKnown RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 PPHLN1Q8NEY8 458 aaKnown RBP12.17□□□□□ -0.46
SYNE2-208ENST00000553289 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MED15Q96RN5 788 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 ERGIC2Q96RQ1 377 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 SLC13A1Q9BZW2 595 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 MLXIPLQ9NP71 852 aa12.17□□□□□ -0.46
SYNE2-208ENST00000553289 PSMC3IPQ9P2W1 217 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms