RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 RASSF8Q8NHQ8 419 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 PPP1R10Q96QC0 940 aaKnown RBP17.43■□□□□ 0.38
CDK4-215ENST00000553237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDK4-215ENST00000553237 LIMD1Q9UGP4 676 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 CLIC4Q9Y696 253 aa17.43■□□□□ 0.38
CDK4-215ENST00000553237 TECTAO75443 2155 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 SMIM28A0A1B0GU29 152 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 CCDC195A0A1B0GUA6 201 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 TGM5O43548 720 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 RFPL2O75678 378 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 SYT1P21579 422 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 YARSP54577 528 aaKnown RBP17.42■□□□□ 0.38
CDK4-215ENST00000553237 FAM173BQ6P4H8 233 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 MPZL3Q6UWV2 235 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 GPBP1Q86WP2 473 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 TDRD5Q8NAT2 981 aaKnown RBP17.42■□□□□ 0.38
CDK4-215ENST00000553237 TMEM161BQ8NDZ6 487 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 FAM122AQ96E09 287 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 TTPALQ9BTX7 342 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 GOLGA2P5Q9HBQ8 144 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 BLOC1S4Q9NUP1 217 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 KCND2Q9NZV8 630 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 FNIP2Q9P278 1114 aa17.42■□□□□ 0.38
CDK4-215ENST00000553237 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
CDK4-215ENST00000553237 ABLIM1O14639 778 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 B3GAT3O94766 335 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 ASGR2P07307 311 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 MAPTP10636 758 aaKnown RBP17.41■□□□□ 0.38
CDK4-215ENST00000553237 MCF2P10911 925 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 PLCG1P19174 1290 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 PROZP22891 400 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
CDK4-215ENST00000553237 CLCNKBP51801 687 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 MCM6Q14566 821 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 SEZ6Q53EL9 994 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 SPECC1Q5M775 1068 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 ELMSAN1Q6PJG2 1045 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 GPR65Q8IYL9 337 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 KREMEN2Q8NCW0 462 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 LNX1Q8TBB1 728 aaPredicted RBP17.41■□□□□ 0.38
CDK4-215ENST00000553237 PBXIP1Q96AQ6 731 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 MFSD14AQ96MC6 490 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 ACAP3Q96P50 834 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 TOPORSQ9NS56 1045 aaPredicted RBP17.41■□□□□ 0.38
CDK4-215ENST00000553237 ANKFY1Q9P2R3 1169 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 DPP7Q9UHL4 492 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 KCNG1Q9UIX4 513 aa17.41■□□□□ 0.38
CDK4-215ENST00000553237 SLC26A4O43511 780 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 MARCKSP29966 332 aaPredicted RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 PLA2G5P39877 138 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 SOX4Q06945 474 aaPredicted RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 SIGLEC14Q08ET2 396 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 RESTQ13127 1097 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 PSMD5Q16401 504 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 LILRA6Q6PI73 481 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 DCLRE1AQ6PJP8 1040 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 ALKAL1Q6UXT8 129 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 C15orf39Q6ZRI6 1047 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 CCDC149Q6ZUS6 474 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 USP49Q70CQ1 688 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 CMASQ8NFW8 434 aaPredicted RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 ZMAT2Q96NC0 199 aaKnown RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 CLSTN3Q9BQT9 956 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 REEP2Q9BRK0 252 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 ZHX3Q9H4I2 956 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
CDK4-215ENST00000553237 USTQ9Y2C2 406 aa17.4■□□□□ 0.38
CDK4-215ENST00000553237 I3L4J1 428 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 ADAM12O43184 909 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 TOM1L1O75674 476 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 FAM13AO94988 1023 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 BRD1O95696 1058 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
CDK4-215ENST00000553237 MATR3P43243 847 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDK4-215ENST00000553237 CREMQ03060 361 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 ELAVL2Q12926 359 aaKnown RBP17.39■□□□□ 0.37
CDK4-215ENST00000553237 PTPAQ15257 358 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 UPP1Q16831 310 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 XKR4Q5GH76 650 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 CD300LGQ6UXG3 332 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 HAUS6Q7Z4H7 955 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 ZDHHC14Q8IZN3 488 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 PLCD3Q8N3E9 789 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 PIK3R5Q8WYR1 880 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 SMG7Q92540 1137 aaKnown RBP17.39■□□□□ 0.37
CDK4-215ENST00000553237 RAD54LQ92698 747 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 SNX21Q969T3 373 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 ACSF2Q96CM8 615 aaPredicted RBP17.39■□□□□ 0.37
CDK4-215ENST00000553237 BICD1Q96G01 975 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 INTS4Q96HW7 963 aaKnown RBP17.39■□□□□ 0.37
CDK4-215ENST00000553237 SNX27Q96L92 541 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 SMOC2Q9H3U7 446 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 PLEKHA4Q9H4M7 779 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 PIDD1Q9HB75 910 aa17.39■□□□□ 0.37
CDK4-215ENST00000553237 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms