RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PCDHA7Q9UN72 937 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 HCFC2Q9Y5Z7 792 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 TTC28Q96AY4 2481 aa20.56■□□□□ 0.88
HDAC4-217ENST00000553145 SMIM28A0A1B0GU29 152 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 TNFRSF10AO00220 468 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 KIF4AO95239 1232 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 YARSP54577 528 aaKnown RBP20.55■□□□□ 0.88
HDAC4-217ENST00000553145 GTF2BQ00403 316 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 BMS1Q14692 1282 aaKnown RBP20.55■□□□□ 0.88
HDAC4-217ENST00000553145 FUT10Q6P4F1 479 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 SLC39A4Q6P5W5 647 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 HASPINQ8TF76 798 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 STAMQ92783 540 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 B3GALT6Q96L58 329 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 ZMAT2Q96NC0 199 aaKnown RBP20.55■□□□□ 0.88
HDAC4-217ENST00000553145 GOLGA2P5Q9HBQ8 144 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 CD320Q9NPF0 282 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 STK39Q9UEW8 545 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 TRIP11Q15643 1979 aa20.55■□□□□ 0.88
HDAC4-217ENST00000553145 C2CD2LO14523 706 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 HNRNPDLO14979 420 aaKnown RBP20.54■□□□□ 0.88
HDAC4-217ENST00000553145 CLDN3O15551 220 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 IGFBP6P24592 240 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-217ENST00000553145 ME1P48163 572 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 LIG4P49917 911 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 SOX4Q06945 474 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-217ENST00000553145 SMAD2Q15796 467 aaKnown RBP20.54■□□□□ 0.88
HDAC4-217ENST00000553145 ANKRD54Q6NXT1 300 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 SYCE2Q6PIF2 218 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 MAP4K3Q8IVH8 894 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 SLC22A17Q8WUG5 538 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 DHX58Q96C10 678 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 ACAP3Q96P50 834 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 KLHL5Q96PQ7 755 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 IKZF4Q9H2S9 585 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 ST6GALNAC4Q9H4F1 302 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 MRPL17Q9NRX2 175 aaKnown RBP20.54■□□□□ 0.88
HDAC4-217ENST00000553145 TOPORSQ9NS56 1045 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-217ENST00000553145 RCOR1Q9UKL0 485 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 CFAP45Q9UL16 551 aa20.54■□□□□ 0.88
HDAC4-217ENST00000553145 TISP43B9A030 160 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 PPP1R37O75864 691 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 URODP06132 367 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 CNPP09543 421 aaKnown RBP20.53■□□□□ 0.88
HDAC4-217ENST00000553145 EPCAMP16422 314 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 SCP2P22307 547 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 GLUD2P49448 558 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 SLC10A6Q3KNW5 377 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 ZBTB41Q5SVQ8 909 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 KIAA0319Q5VV43 1072 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 ZNF720Q7Z2F6 126 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 APOL5Q9BWW9 433 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 CHST7Q9NS84 486 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 TBC1D7Q9P0N9 293 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 CNTN3Q9P232 1028 aa20.53■□□□□ 0.88
HDAC4-217ENST00000553145 USP15Q9Y4E8 981 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-217ENST00000553145 FRMD3A2A2Y4 597 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 FAM189A1O60320 539 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 TADA2AO75478 443 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 SRGAP2BP0DMP2 458 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 IDEP14735 1019 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 KCNE1P15382 129 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 GAP43P17677 238 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 TNFSF9P41273 254 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 MATR3P43243 847 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC4-217ENST00000553145 DSG1Q02413 1049 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 CASP10Q92851 521 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 FGFBP2Q9BYJ0 223 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 S1PR5Q9H228 398 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 KBTBD4Q9NVX7 518 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 SEL1LQ9UBV2 794 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 FAM50BQ9Y247 325 aa20.52■□□□□ 0.88
HDAC4-217ENST00000553145 CITO14578 2027 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 A0A0B4J269 797 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 CXCL8P10145 99 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 CLCNKBP51801 687 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 CASP5P51878 434 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 ZP2Q05996 745 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 KCNA1Q09470 495 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 BECN1Q14457 450 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 CD300LGQ6UXG3 332 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 TMEM130Q8N3G9 435 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 C3orf58Q8NDZ4 430 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 C18orf25Q96B23 403 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-217ENST00000553145 EMILIN2Q9BXX0 1053 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 TNMDQ9H2S6 317 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 MRPL44Q9H9J2 332 aaKnown RBP20.51■□□□□ 0.87
HDAC4-217ENST00000553145 CDH22Q9UJ99 828 aa20.51■□□□□ 0.87
HDAC4-217ENST00000553145 PDCD11Q14690 1871 aaKnown RBP20.51■□□□□ 0.87
HDAC4-217ENST00000553145 SF3B1O75533 1304 aaKnown RBP eCLIP20.51■□□□□ 0.87
HDAC4-217ENST00000553145 TMEM189-UBE2V1I3L0A0 370 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 TEX28O15482 410 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 MYBP10242 640 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 KLRC2P26717 231 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 CLCN4P51793 760 aa20.5■□□□□ 0.87
HDAC4-217ENST00000553145 UPP1Q16831 310 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms