RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
CDK4-214ENST00000552862 NXF3Q9H4D5 531 aaKnown RBP13.75□□□□□ -0.21
CDK4-214ENST00000552862 TMEM134Q9H6X4 195 aa13.75□□□□□ -0.21
CDK4-214ENST00000552862 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
CDK4-214ENST00000552862 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 SYN3O14994 580 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 ZBTB39O15060 712 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 B3GAT3O94766 335 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 CTDNEP1O95476 244 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
CDK4-214ENST00000552862 STRN3Q13033 797 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 ZNF528Q3MIS6 628 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 GSTCDQ8NEC7 633 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 APPL2Q8NEU8 664 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 FBXO18Q8NFZ0 1043 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 MRPL4Q9BYD3 311 aaKnown RBP13.74□□□□□ -0.21
CDK4-214ENST00000552862 FAM126AQ9BYI3 521 aaPredicted RBP13.74□□□□□ -0.21
CDK4-214ENST00000552862 GPR62Q9BZJ7 368 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 AVENQ9NQS1 362 aaPredicted RBP13.74□□□□□ -0.21
CDK4-214ENST00000552862 ARHGEF3Q9NR81 526 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 FBXW11Q9UKB1 542 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 HES2Q9Y543 173 aa13.74□□□□□ -0.21
CDK4-214ENST00000552862 MYO10Q9HD67 2058 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 PRR23AA6NEV1 266 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 LRG1P02750 347 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 C8AP07357 584 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 PTPN2P17706 415 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 MARCKSP29966 332 aaPredicted RBP13.73□□□□□ -0.21
CDK4-214ENST00000552862 PRPHP41219 470 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 STARD6P59095 220 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 ATF7IP2Q5U623 682 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 NOSTRINQ8IVI9 506 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 ZNF461Q8TAF7 563 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 LNX1Q8TBB1 728 aaPredicted RBP13.73□□□□□ -0.21
CDK4-214ENST00000552862 ACAP3Q96P50 834 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 SNTG2Q9NY99 539 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
CDK4-214ENST00000552862 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 POTEMA6NI47 508 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 MAN2B1O00754 1011 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 RFPL2O75678 378 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 RECQL4O94761 1208 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 PDGFBP01127 241 aaPredicted RBP13.72□□□□□ -0.21
CDK4-214ENST00000552862 CFHP08603 1231 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
CDK4-214ENST00000552862 NRLP54845 237 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 PLD1Q13393 1074 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 TTC38Q5R3I4 469 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 CYP4A22Q5TCH4 519 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 GET4Q7L5D6 327 aaPredicted RBP13.72□□□□□ -0.21
CDK4-214ENST00000552862 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 TAS1R1Q7RTX1 841 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 NECAB1Q8N987 351 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
CDK4-214ENST00000552862 NTPCRQ9BSD7 190 aaKnown RBP13.72□□□□□ -0.21
CDK4-214ENST00000552862 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 POLIQ9UNA4 740 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 NUB1Q9Y5A7 615 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
CDK4-214ENST00000552862 KANSL1LA0AUZ9 987 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 CCDC169A6NNP5 214 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 PRRG1O14668 218 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 FGF19O95750 216 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 MCF2P10911 925 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 GLULP15104 373 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 FGFR3P22607 806 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 GRM5P41594 1212 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 HTR4Q13639 388 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 PABPC1LQ4VXU2 614 aaKnown RBP13.71□□□□□ -0.21
CDK4-214ENST00000552862 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 MSANTD3Q96H12 275 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 SNX27Q96L92 541 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 CLSTN3Q9BQT9 956 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 BHMT2Q9H2M3 363 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 TBC1D17Q9HA65 648 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
CDK4-214ENST00000552862 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
CDK4-214ENST00000552862 MTRRQ9UBK8 725 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 ZMYM5Q9UJ78 669 aa13.71□□□□□ -0.21
CDK4-214ENST00000552862 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.21
CDK4-214ENST00000552862 PTPRZ1P23471 2315 aaPredicted RBP13.71□□□□□ -0.21
CDK4-214ENST00000552862 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
CDK4-214ENST00000552862 SPTLC1O15269 473 aa13.7□□□□□ -0.22
CDK4-214ENST00000552862 B4GALT5O43286 388 aa13.7□□□□□ -0.22
CDK4-214ENST00000552862 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
CDK4-214ENST00000552862 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms