RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 FAM26FQ5R3K3 315 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 FMR1NBQ8N0W7 255 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-225ENST00000551845 GSTCDQ8NEC7 633 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 GDPD5Q8WTR4 605 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 MSTO1Q9BUK6 570 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 COLEC11Q9BWP8 271 aa11.6□□□□□ -0.55
PTCH1-225ENST00000551845 CHD7Q9P2D1 2997 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 A0A0B4J269 797 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 NT5C1B-RDH14C9J2C7 533 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 ANKRD63C9JTQ0 380 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 GRM6O15303 877 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 EIF3DO15371 548 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTCH1-225ENST00000551845 RPN1P04843 607 aaKnown RBP11.59□□□□□ -0.55
PTCH1-225ENST00000551845 OR1G1P47890 313 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 CASP5P51878 434 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 KCNA1Q09470 495 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 GRIK3Q13003 919 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
PTCH1-225ENST00000551845 KMT5BQ4FZB7 885 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 ALKAL1Q6UXT8 129 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 CEP120Q8N960 986 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 ENGASEQ8NFI3 743 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 ZNF507Q8TCN5 953 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 POF1BQ8WVV4 589 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 POMGNT1Q8WZA1 660 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 HPS3Q969F9 1004 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 MRPL38Q96DV4 380 aaKnown RBP11.59□□□□□ -0.55
PTCH1-225ENST00000551845 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 UBE2ZQ9H832 354 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-225ENST00000551845 PLEKHA5Q9HAU0 1116 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 SLC39A2Q9NP94 309 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 HCSTQ9UBK5 93 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 STYXL1Q9Y6J8 313 aa11.59□□□□□ -0.55
PTCH1-225ENST00000551845 ZMYM2Q9UBW7 1377 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 SMIM28A0A1B0GU29 152 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 NRP1O14786 923 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 OGTO15294 1046 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 KLRC4O43908 158 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 GADD45BO75293 160 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 KIF20AO95235 890 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 LDHAP00338 332 aaKnown RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 PBX3P40426 434 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 SLC11A1P49279 550 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 UBE2HP62256 183 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 SNRPFP62306 86 aaKnown RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 EHHADHQ08426 723 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 DPYDQ12882 1025 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 TUSC3Q13454 348 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 SEZ6Q53EL9 994 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 XKR4Q5GH76 650 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 PDE12Q6L8Q7 609 aaKnown RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 CD302Q8IX05 232 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 ELOA2Q8IYF1 753 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 SLC39A11Q8N1S5 342 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 IGSF21Q96ID5 467 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 FBXL18Q96ME1 805 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 HAPLN2Q9GZV7 340 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 RPF1Q9H9Y2 349 aaKnown RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 SLC38A7Q9NVC3 462 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 DNAJB4Q9UDY4 337 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 STK39Q9UEW8 545 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 AGO2Q9UKV8 859 aaKnown RBP11.58□□□□□ -0.56
PTCH1-225ENST00000551845 LZTS1Q9Y250 596 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 MUC6Q6W4X9 2439 aa11.58□□□□□ -0.56
PTCH1-225ENST00000551845 PTGESO14684 152 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 KIAA0391O15091 583 aaKnown RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 KINO60870 393 aaKnown RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 TADA2AO75478 443 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 SMC2O95347 1197 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 IL9P15248 144 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 KCNE1P15382 129 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 GARTP22102 1010 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 KCNA5P22460 613 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 POU5F1Q01860 360 aaKnown RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 DSC1Q08554 894 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 STK4Q13043 487 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 SLC10A6Q3KNW5 377 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 SLC39A4Q6P5W5 647 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 CLEC17AQ6ZS10 378 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 EPM2AIP1Q7L775 607 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 TMC7Q7Z402 723 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 DDX53Q86TM3 631 aaKnown RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 PPP2R3CQ969Q6 453 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 GBP4Q96PP9 640 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 FGFBP2Q9BYJ0 223 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 KCNH6Q9H252 994 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 TLR9Q9NR96 1032 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 CPSF3Q9UKF6 684 aaKnown RBP11.57□□□□□ -0.56
PTCH1-225ENST00000551845 SIP14410 1827 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
PTCH1-225ENST00000551845 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-225ENST00000551845 RHOBTB3O94955 611 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms