RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	ZBTB44	Q8NCP5	570 aa		11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	LNX1	Q8TBB1	728 aa	Predicted RBP	11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	SLC7A14	Q8TBB6	771 aa		11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	SECISBP2L	Q93073	1101 aa	Known RBP	11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	NAP1L4	Q99733	375 aa	Known RBP	11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	KXD1	Q9BQD3	176 aa		11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	PHF20	Q9BVI0	1012 aa		11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	EPC1	Q9H2F5	836 aa		11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	ZSCAN32	Q9NX65	697 aa		11.79	□□□□□ -0.52
PFKM-223	ENST00000551485	MAP1B	P46821	2468 aa	Known RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	ADAM12	O43184	909 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	KRT37	O76014	449 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	SLITRK3	O94933	977 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	LYPLA2	O95372	231 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	CD72	P21854	359 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	TARS	P26639	723 aa	Known RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	ATXN1	P54253	815 aa	Known RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	LMNB2	Q03252	620 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	ELAVL2	Q12926	359 aa	Known RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	ZBTB41	Q5SVQ8	909 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	PDXDC1	Q6P996	788 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	TPRG1	Q6ZUI0	275 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	PIK3AP1	Q6ZUJ8	805 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	RUFY3	Q7L099	469 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	SLFN12	Q8IYM2	578 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	NELL1	Q92832	810 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	CLDN23	Q96B33	292 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	ZNF274	Q96GC6	653 aa	Predicted RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	PRMT8	Q9NR22	394 aa	Predicted RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	ANKEF1	Q9NU02	776 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	HCFC1R1	Q9NWW0	138 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	CDV3	Q9UKY7	258 aa	Known RBP	11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	KCNH3	Q9ULD8	1083 aa		11.78	□□□□□ -0.52
PFKM-223	ENST00000551485	PRR5-ARHGAP8	B1AHC4	643 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	PTGES	O14684	152 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	BAG4	O95429	457 aa	Known RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	RPS9	P46781	194 aa	Known RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	RARRES1	P49788	294 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	ARHGAP8	P85298	464 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	STK3	Q13188	491 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	RAB33A	Q14088	237 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	PABPC1L	Q4VXU2	614 aa	Known RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	ING5	Q8WYH8	240 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	PRIMPOL	Q96LW4	560 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	CCDC43	Q96MW1	224 aa	Known RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	NELL2	Q99435	816 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	HSD17B14	Q9BPX1	270 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	LARP6	Q9BRS8	491 aa	Known RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	ZSWIM6	Q9HCJ5	1215 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	DNMT3B	Q9UBC3	853 aa	Known RBP	11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	CHD8	Q9HCK8	2581 aa		11.77	□□□□□ -0.53
PFKM-223	ENST00000551485	LRRIQ4	A6NIV6	560 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	NCAM2	O15394	837 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	TBC1D4	O60343	1298 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	ECI2	O75521	394 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	RECQL4	O94761	1208 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	TH	P07101	528 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	TGM1	P22735	817 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	NAB2	Q15742	525 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	UVSSA	Q2YD98	709 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	EARS2	Q5JPH6	523 aa	Known RBP	11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	TSSK4	Q6SA08	328 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	OXER1	Q8TDS5	423 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	MTRR	Q9UBK8	725 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	USP18	Q9UMW8	372 aa		11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	MRPS17	Q9Y2R5	130 aa	Known RBP	11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	MRPS23	Q9Y3D9	190 aa	Known RBP	11.76	□□□□□ -0.53
PFKM-223	ENST00000551485	N4BP3	O15049	544 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	USO1	O60763	962 aa	Known RBP	11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	CDKL5	O76039	1030 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	REC8	O95072	547 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	RHO	P08100	348 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	XBP1	P17861	261 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	FGFR3	P22607	806 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	OR1D2	P34982	312 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	ADCY1	Q08828	1119 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	FZD5	Q13467	585 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	FAM187B	Q17R55	369 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	SLC5A9	Q2M3M2	681 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	ZNF852	Q6ZMS4	543 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	RTL10	Q7L3V2	364 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	DNASE1L2	Q92874	299 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	RTKN	Q9BST9	563 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	PLA2G2F	Q9BZM2	168 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	CXCL16	Q9H2A7	254 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	FZD8	Q9H461	694 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	PDZD7	Q9H5P4	517 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	PARD6A	Q9NPB6	346 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	GPRC5C	Q9NQ84	441 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	HEBP1	Q9NRV9	189 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	GJB4	Q9NTQ9	266 aa		11.75	□□□□□ -0.53
PFKM-223	ENST00000551485	SNTG2	Q9NY99	539 aa		11.75	□□□□□ -0.53

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