RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 DDX1Q92499 740 aaKnown RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 FNBP1Q96RU3 617 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 ACO2Q99798 780 aaKnown RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 JPH2Q9BR39 696 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 FUT8Q9BYC5 575 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 RRAGCQ9HB90 399 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 SUCLA2Q9P2R7 463 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 IVNS1ABPQ9Y6Y0 642 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-208ENST00000551338 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-208ENST00000551338 FAM170AA1A519 330 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 STRNO43815 780 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 BUB1BO60566 1050 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-208ENST00000551338 RTN2O75298 545 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 ERLIN1O75477 346 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 MMEP08473 750 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 CYP11B1P15538 503 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 TNNI1P19237 187 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 PROZP22891 400 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 TNFSF9P41273 254 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 ADCYAP1R1P41586 468 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 CDR2Q01850 454 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 PTPROQ16827 1216 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 FAM110CQ1W6H9 321 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 CFAP221Q4G0U5 840 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 SYCE1Q8N0S2 351 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 OR5B17Q8NGF7 314 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 NPLOC4Q8TAT6 608 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 TAF4BQ92750 862 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-208ENST00000551338 MAML3Q96JK9 1138 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 PBKQ96KB5 322 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 FAM81BQ96LP2 452 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 PTPN18Q99952 460 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 RNPEPQ9H4A4 650 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
RAB5C-208ENST00000551338 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
RAB5C-208ENST00000551338 ERAP1Q9NZ08 941 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 COG5Q9UP83 839 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 COL1A2P08123 1366 aa12.39□□□□□ -0.43
RAB5C-208ENST00000551338 MAP2K7O14733 419 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 OGTO15294 1046 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 TOM1L1O75674 476 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 GJB1P08034 283 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 GZMAP12544 262 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 INSRRP14616 1297 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 ACO1P21399 889 aaKnown RBP12.38□□□□□ -0.43
RAB5C-208ENST00000551338 PDE6CP51160 858 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 PTENP60484 403 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 MCL1Q07820 350 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 BIRC3Q13489 604 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 TFDP1Q14186 410 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 MAPK6Q16659 721 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 EEF1DP3Q658K8 133 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 EFCAB12Q6NXP0 572 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 PEX26Q7Z412 305 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 ZBTB33Q86T24 672 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 RHPN2Q8IUC4 686 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 RHOT2Q8IXI1 618 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 METTL13Q8N6R0 699 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 RUBCNQ92622 972 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 HES6Q96HZ4 224 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-208ENST00000551338 NLRP4Q96MN2 994 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 LRRC1Q9BTT6 524 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 FZD8Q9H461 694 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 CPSF3Q9UKF6 684 aaKnown RBP12.38□□□□□ -0.43
RAB5C-208ENST00000551338 AMFRQ9UKV5 643 aa12.38□□□□□ -0.43
RAB5C-208ENST00000551338 UMODL1Q5DID0 1318 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 ACKR2O00590 384 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 KCNK3O14649 394 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
RAB5C-208ENST00000551338 CLDN3O15551 220 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 MTA2O94776 668 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 CALCAP01258 141 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 FTLP02792 175 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-208ENST00000551338 CLTAP09496 248 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 ZNF286BP0CG31 522 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 HOXD8P13378 290 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-208ENST00000551338 MCM3P25205 808 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 GRM1Q13255 1194 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 WDR44Q5JSH3 913 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
RAB5C-208ENST00000551338 C11orf63Q6NUN7 778 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms