RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PCDH15Q96QU1 1955 aa15.15■□□□□ 0.02
SNRPF-203ENST00000551316 WDR27A2RRH5 827 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 ADAMTS3O15072 1205 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 MOSPD3O75425 235 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 NT5C2P49902 561 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 TARBP2Q15633 366 aaKnown RBP15.14■□□□□ 0.01
SNRPF-203ENST00000551316 RAB44Q7Z6P3 723 aaPredicted RBP15.14■□□□□ 0.01
SNRPF-203ENST00000551316 NLRP4Q96MN2 994 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 IFT122Q9HBG6 1241 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 ZFP14Q9HCL3 533 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 KANSL3Q9P2N6 904 aa15.14■□□□□ 0.01
SNRPF-203ENST00000551316 URB1O60287 2271 aaKnown RBP15.14■□□□□ 0.01
SNRPF-203ENST00000551316 COL5A1P20908 1838 aaPredicted RBP15.13■□□□□ 0.01
SNRPF-203ENST00000551316 GJA1P17302 382 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 PSMC3P17980 439 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 CTHP32929 405 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 IRX4P78413 519 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 PIP4P1Q86T03 277 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 RHPN2Q8IUC4 686 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 PIK3R5Q8WYR1 880 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 HHIPQ96QV1 700 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 SNTG2Q9NY99 539 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 IPPQ9Y573 584 aa15.13■□□□□ 0.01
SNRPF-203ENST00000551316 SPECC1L-ADORA2AF8WAN1 911 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 IPO5O00410 1097 aaKnown RBP15.12■□□□□ 0.01
SNRPF-203ENST00000551316 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
SNRPF-203ENST00000551316 KIF4AO95239 1232 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 RXRAP19793 462 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 ANTXR2P58335 489 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 PLA2G4DQ86XP0 818 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 SLC39A7Q92504 469 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 ZFYVE19Q96K21 471 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 APOL6Q9BWW8 343 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 SEC63Q9UGP8 760 aaKnown RBP15.12■□□□□ 0.01
SNRPF-203ENST00000551316 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 PCDHB15Q9Y5E8 787 aa15.12■□□□□ 0.01
SNRPF-203ENST00000551316 IGKV6-21A0A0C4DH24 114 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 IFIT3O14879 490 aaKnown RBP15.11■□□□□ 0.01
SNRPF-203ENST00000551316 AKAP3O75969 853 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 STBD1O95210 358 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 SREBF1P36956 1147 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 IMMTQ16891 758 aaKnown RBP15.11■□□□□ 0.01
SNRPF-203ENST00000551316 MTERF2Q49AM1 385 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 ZNF746Q6NUN9 644 aaPredicted RBP15.11■□□□□ 0.01
SNRPF-203ENST00000551316 CEP57Q86XR8 500 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 GPIHBP1Q8IV16 184 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 ZNF843Q8N446 348 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 FAM167AQ96KS9 214 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 COLEC11Q9BWP8 271 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 CXCL16Q9H2A7 254 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 NXF3Q9H4D5 531 aaKnown RBP15.11■□□□□ 0.01
SNRPF-203ENST00000551316 CCDC86Q9H6F5 360 aaKnown RBP15.11■□□□□ 0.01
SNRPF-203ENST00000551316 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 SCUBE2Q9NQ36 999 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 FSCN3Q9NQT6 498 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 IGSF5Q9NSI5 407 aa15.11■□□□□ 0.01
SNRPF-203ENST00000551316 HELZP42694 1942 aaKnown RBP15.11■□□□□ 0.01
SNRPF-203ENST00000551316 MYBPHLA2RUH7 354 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 ZNF263O14978 683 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 PSAPP07602 524 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 ITGA4P13612 1032 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 OR1D2P34982 312 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 MAPK8P45983 427 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 PDE1AP54750 535 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 CREMQ03060 361 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 DGKKQ5KSL6 1271 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 FAM171A1Q5VUB5 890 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 WWC2Q6AWC2 1192 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 ZNF410Q86VK4 478 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 HS6ST3Q8IZP7 471 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 ZNF710Q8N1W2 664 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 SMARCD2Q92925 531 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 CHFRQ96EP1 664 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 LRRC3BQ96PB8 259 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 CORO1BQ9BR76 489 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 AVENQ9NQS1 362 aaPredicted RBP15.1■□□□□ 0.01
SNRPF-203ENST00000551316 GTSE1Q9NYZ3 720 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 PCDHA10Q9Y5I2 948 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 TRIP11Q15643 1979 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 NBPF19A0A087WUL8 3843 aa15.1■□□□□ 0.01
SNRPF-203ENST00000551316 PTPRQQ9UMZ3 2332 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 CCDC194A0A1B0GVG4 234 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 HEPACAM2A8MVW5 462 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 BCKDHBP21953 392 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 RAB33AQ14088 237 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 CRYGNQ8WXF5 182 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 TTPALQ9BTX7 342 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 SUCLA2Q9P2R7 463 aaPredicted RBP15.09■□□□□ 0.01
SNRPF-203ENST00000551316 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNRPF-203ENST00000551316 CEP192Q8TEP8 1941 aa15.09■□□□□ 0.01
SNRPF-203ENST00000551316 CASTOR2A6NHX0 329 aa15.08■□□□□ 0
SNRPF-203ENST00000551316 KHNYNO15037 678 aaKnown RBP15.08■□□□□ 0
SNRPF-203ENST00000551316 SDSP20132 328 aa15.08■□□□□ 0
SNRPF-203ENST00000551316 KPNA1P52294 538 aaPredicted RBP15.08■□□□□ 0
SNRPF-203ENST00000551316 HSP90AA2PQ14568 343 aaPredicted RBP15.08■□□□□ 0
SNRPF-203ENST00000551316 PMS2CLQ68D20 193 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms