RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 EFCAB14O75071 495 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 OFD1O75665 1012 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 ITGA4P13612 1032 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 MLH1P40692 756 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 ZNF165P49910 485 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 FKBP3Q00688 224 aaKnown RBP14.69□□□□□ -0.06
ERBB3-215ENST00000550828 CYP24A1Q07973 514 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 ADAM9Q13443 819 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 SNRNP35Q16560 246 aaKnown RBP14.69□□□□□ -0.06
ERBB3-215ENST00000550828 XKR4Q5GH76 650 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 SPATA1Q5VX52 437 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 SCARA3Q6AZY7 606 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 FAM43BQ6ZT52 329 aaPredicted RBP14.69□□□□□ -0.06
ERBB3-215ENST00000550828 TOP1MTQ969P6 601 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 MFSD14AQ96MC6 490 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 GAD1Q99259 594 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 BPIFA3Q9BQP9 254 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 CCDC94Q9BW85 323 aaPredicted RBP14.69□□□□□ -0.06
ERBB3-215ENST00000550828 SRRTQ9BXP5 876 aaKnown RBP14.69□□□□□ -0.06
ERBB3-215ENST00000550828 SAMSN1Q9NSI8 373 aaKnown RBP14.69□□□□□ -0.06
ERBB3-215ENST00000550828 NFE2L3Q9Y4A8 694 aa14.69□□□□□ -0.06
ERBB3-215ENST00000550828 ATG2AQ2TAZ0 1938 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 LACTBL1A8MY62 500 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 KIAA0391O15091 583 aaKnown RBP14.68□□□□□ -0.06
ERBB3-215ENST00000550828 INPPL1O15357 1258 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 UPP2O95045 317 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 EOMESO95936 686 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 AMHP03971 560 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 SKIP12755 728 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 MYL5Q02045 173 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 SPAG1Q07617 926 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 HSP90AA4PQ58FG1 418 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 ZNF697Q5TEC3 545 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 CDKAL1Q5VV42 579 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 FAM117BQ6P1L5 589 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 APBB1IPQ7Z5R6 666 aaPredicted RBP14.68□□□□□ -0.06
ERBB3-215ENST00000550828 LUZP1Q86V48 1076 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 EFCAB13Q8IY85 973 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 FAM186BQ8IYM0 893 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 HELQQ8TDG4 1101 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 CEP63Q96MT8 703 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 GUCD1Q96NT3 240 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 CASD1Q96PB1 797 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 RPF1Q9H9Y2 349 aaKnown RBP14.68□□□□□ -0.06
ERBB3-215ENST00000550828 RSAD1Q9HA92 442 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 PDE11AQ9HCR9 933 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 TOPORSQ9NS56 1045 aaPredicted RBP14.68□□□□□ -0.06
ERBB3-215ENST00000550828 RBAKQ9NYW8 714 aaPredicted RBP14.68□□□□□ -0.06
ERBB3-215ENST00000550828 CNTN3Q9P232 1028 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 PARP2Q9UGN5 583 aa14.68□□□□□ -0.06
ERBB3-215ENST00000550828 PLXNA4Q9HCM2 1894 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 VWA8A3KMH1 1905 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 ARL5CA6NH57 179 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 ZNF233A6NK53 670 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 CETN3O15182 167 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 DGKIO75912 1065 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 NFICP08651 508 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 ZNF18P17022 549 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 RPL13P26373 211 aaKnown RBP14.67□□□□□ -0.06
ERBB3-215ENST00000550828 KCNJ6P48051 423 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 MCCD1P59942 119 aaPredicted RBP14.67□□□□□ -0.06
ERBB3-215ENST00000550828 DLG4P78352 724 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 PSMD6Q15008 389 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 NAB2Q15742 525 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 GLRA4Q5JXX5 417 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 FILIP1Q7Z7B0 1213 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 ZNF689Q96CS4 500 aaPredicted RBP14.67□□□□□ -0.06
ERBB3-215ENST00000550828 MKNK1Q9BUB5 465 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 FANCLQ9NW38 375 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 CACNG4Q9UBN1 327 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 GIT1Q9Y2X7 761 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 PCDHB7Q9Y5E2 793 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 SLC4A7Q9Y6M7 1214 aa14.67□□□□□ -0.06
ERBB3-215ENST00000550828 TSC2P49815 1807 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 A0A0C4DFX4 3053 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 IKBKBO14920 756 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 MAPK13O15264 365 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 SLC16A3O15427 465 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 LDHAP00338 332 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 TRIM49P0CI25 452 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 TRIM49CP0CI26 452 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 KCNE1P15382 129 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 PSMC2P35998 433 aaKnown RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 SCNN1GP51170 649 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 GUCY2FP51841 1108 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 HTRA4P83105 476 aaPredicted RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 SOX4Q06945 474 aaPredicted RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 ZBTB6Q15916 424 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 KYAT1Q16773 422 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 LMBRD2Q68DH5 695 aaPredicted RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 JADE1Q6IE81 842 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 HERC6Q8IVU3 1022 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 OR5B17Q8NGF7 314 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 FAM200AQ8TCP9 573 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 PARD3BQ8TEW8 1205 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 ZNF516Q92618 1163 aa14.66□□□□□ -0.06
ERBB3-215ENST00000550828 C18orf25Q96B23 403 aaPredicted RBP14.66□□□□□ -0.06
ERBB3-215ENST00000550828 PGBD4Q96DM1 585 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms