RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 GOLGA8BA8MQT2 603 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 LOC285556D6RIA3 1793 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 RFXAPO00287 272 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 AURKAO14965 403 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 PFKFB2O60825 505 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 MPOP05164 745 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 PARP1P09874 1014 aaKnown RBP6.63□□□□□ -1.35
SCAF11-213ENST00000550629 HSPA6P17066 643 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 PDIA3P30101 505 aaKnown RBP6.63□□□□□ -1.35
SCAF11-213ENST00000550629 VIPR1P32241 457 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 MAP2K2P36507 400 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 ETFBP38117 255 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 SLC1A4P43007 532 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 HMGCS2P54868 508 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 MOGSQ13724 837 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 GRM4Q14833 912 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 BTNL9Q6UXG8 535 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 ANKRD23Q86SG2 305 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 FAM160B2Q86V87 743 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 FANCBQ8NB91 859 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 CTCFLQ8NI51 663 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-213ENST00000550629 CHURC1Q8WUH1 139 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 PHIPQ8WWQ0 1821 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 CAPNS2Q96L46 248 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 TCEANC2Q96MN5 208 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 LRRC2Q9BYS8 371 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 TNFRSF12AQ9NP84 129 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 RBM28Q9NW13 759 aaKnown RBP6.63□□□□□ -1.35
SCAF11-213ENST00000550629 MBD1Q9UIS9 605 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-213ENST00000550629 FEM1BQ9UK73 627 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 PNMA2Q9UL42 364 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 CNOT6Q9ULM6 557 aaKnown RBP6.63□□□□□ -1.35
SCAF11-213ENST00000550629 TPCN1Q9ULQ1 816 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 AGTPBP1Q9UPW5 1226 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 AKT3Q9Y243 479 aa6.63□□□□□ -1.35
SCAF11-213ENST00000550629 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 CCL15-CCL14A0A0B4J2E2 113 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 GOLGA8AA7E2F4 631 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 KLRF2D3W0D1 207 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 CDKL5O76039 1030 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 BMP7P18075 431 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 TM4SF4P48230 202 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 METAP2P50579 478 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 STAT2P52630 851 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 AMPD2Q01433 879 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 TRAF1Q13077 416 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 GRB10Q13322 594 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 COG2Q14746 738 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 NCAPHQ15003 741 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 CCL15Q16663 113 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 EEF1DP3Q658K8 133 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 OTUD7BQ6GQQ9 843 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 CPLX2Q6PUV4 134 aaKnown RBP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 LBX2Q6XYB7 198 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 CATSPERGQ6ZRH7 1159 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 MICU3Q86XE3 530 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 TEX2Q8IWB9 1127 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 FAM177A1Q8N128 213 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 MB21D1Q8N884 522 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 PRPF38AQ8NAV1 312 aaKnown RBP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 BRI3BPQ8WY22 251 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 GTF3C6Q969F1 213 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 APBA2Q99767 749 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 LLPHQ9BRT6 129 aaKnown RBP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 SPZ1Q9BXG8 430 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 SLKQ9H2G2 1235 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 RPAP3Q9H6T3 665 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-213ENST00000550629 SIRT5Q9NXA8 310 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 HOXC10Q9NYD6 342 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 MAD2L2Q9UI95 211 aa6.62□□□□□ -1.35
SCAF11-213ENST00000550629 WDR33Q9C0J8 1336 aaKnown RBP6.61□□□□□ -1.35
SCAF11-213ENST00000550629 C2orf71A6NGG8 1288 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 IFNAR1P17181 557 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 L1CAMP32004 1257 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 GCLCP48506 637 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-213ENST00000550629 OAZ1P54368 228 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 ARID5AQ03989 594 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 BECN1Q14457 450 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 ME3Q16798 604 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 CCDC96Q2M329 555 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 KIAA1755Q5JYT7 1200 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 FAM83BQ5T0W9 1011 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 TREML2Q5T2D2 321 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
SCAF11-213ENST00000550629 CYP4F22Q6NT55 531 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 C6orf15Q6UXA7 325 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-213ENST00000550629 GADL1Q6ZQY3 521 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 TMTC3Q6ZXV5 915 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 SPICE1Q8N0Z3 855 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 NUP133Q8WUM0 1156 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 RELTQ969Z4 430 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 PARK7Q99497 189 aaKnown RBP6.61□□□□□ -1.35
SCAF11-213ENST00000550629 SLF1Q9BQI6 1058 aa6.61□□□□□ -1.35
SCAF11-213ENST00000550629 TANGO6Q9C0B7 1094 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms