RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CACNB3P54284 484 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 NPEPPSP55786 919 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 CTXN1P60606 82 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 RAC3P60763 192 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 APBA1Q02410 837 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 MRPL49Q13405 166 aaKnown RBP6.16□□□□□ -1.42
LIMA1-205ENST00000550592 SNAPC2Q13487 334 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 PICALMQ13492 652 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 KIAA0753Q2KHM9 967 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 CCDC157Q569K6 752 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 DARS2Q6PI48 645 aaKnown RBP6.16□□□□□ -1.42
LIMA1-205ENST00000550592 MAEAQ7L5Y9 396 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 HEATR3Q7Z4Q2 680 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 PLEKHH3Q7Z736 793 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 LGI4Q8N135 537 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 SAMD3Q8N6K7 520 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 MDM1Q8TC05 714 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 STON2Q8WXE9 905 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 BHMT2Q9H2M3 363 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 SEC61A2Q9H9S3 476 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 IL23AQ9NPF7 189 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 LMBRD1Q9NUN5 540 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 MOCS1Q9NZB8 636 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 PCDHA3Q9Y5H8 950 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 CHD1O14646 1710 aa6.16□□□□□ -1.42
LIMA1-205ENST00000550592 URB2Q14146 1524 aaKnown RBP6.15□□□□□ -1.42
LIMA1-205ENST00000550592 UBE2QL1A1L167 161 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 GOLIM4O00461 696 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 TYRP14679 529 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 FPR1P21462 350 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 FLT3LGP49771 235 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 ZNF280AP59817 542 aaPredicted RBP6.15□□□□□ -1.42
LIMA1-205ENST00000550592 PPP2CBP62714 309 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 RAB1AP62820 205 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 PPP2CAP67775 309 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 FGL2Q14314 439 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 CNN3Q15417 329 aaKnown RBP6.15□□□□□ -1.42
LIMA1-205ENST00000550592 MFSD14BQ5SR56 506 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 NT5DC1Q5TFE4 455 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 RNF220Q5VTB9 566 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 IL31Q6EBC2 164 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 SWSAP1Q6NVH7 229 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 GADL1Q6ZQY3 521 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 PMM1Q92871 262 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 IL17RAQ96F46 866 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 NEIL1Q96FI4 390 aaPredicted RBP6.15□□□□□ -1.42
LIMA1-205ENST00000550592 KCNH6Q9H252 994 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 AGO3Q9H9G7 860 aaKnown RBP6.15□□□□□ -1.42
LIMA1-205ENST00000550592 PNPOQ9NVS9 261 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 FAM50BQ9Y247 325 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 ACTL7AQ9Y615 435 aa6.15□□□□□ -1.42
LIMA1-205ENST00000550592 ZMYM3Q14202 1370 aa6.15□□□□□ -1.43
LIMA1-205ENST00000550592 NT5C1B-RDH14C9J2C7 533 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 H3BUI4 141 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 PMM2O15305 246 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 TEX33O43247 280 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 C8AP07357 584 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 FTH1P19P0C7X4 201 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 SLC5A1P13866 664 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 SMARCA1P28370 1054 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 BIRC2Q13490 618 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 RIN1Q13671 783 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 PLS1Q14651 629 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 SURF1Q15526 300 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 OTUD7BQ6GQQ9 843 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 ARHGEF18Q6ZSZ5 1173 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 SP8Q8IXZ3 490 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 GPR135Q8IZ08 494 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 SHCBP1Q8NEM2 672 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 FBXO18Q8NFZ0 1043 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 MTFMTQ96DP5 389 aaKnown RBP6.14□□□□□ -1.43
LIMA1-205ENST00000550592 SLC35A4Q96G79 324 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 CEP95Q96GE4 821 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 BORCS6Q96GS4 357 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 TOX2Q96NM4 488 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 RPS6KC1Q96S38 1066 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 NELFAQ9H3P2 528 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 WDCPQ9H6R7 721 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 ABCF2Q9UG63 623 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 OAZ3Q9UMX2 235 aa6.14□□□□□ -1.43
LIMA1-205ENST00000550592 HOXA3O43365 443 aaPredicted RBP6.13□□□□□ -1.43
LIMA1-205ENST00000550592 CR2P20023 1033 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 CFPP27918 469 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 NEK3P51956 506 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 EPHB4P54760 987 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 DACT2Q5SW24 774 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 AFMIDQ63HM1 303 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 PLXDC1Q8IUK5 500 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 KRT78Q8N1N4 520 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 LRTOMTQ8WZ04 291 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 NT5C1BQ96P26 610 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 TCF25Q9BQ70 676 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 NAA15Q9BXJ9 866 aaKnown RBP6.13□□□□□ -1.43
LIMA1-205ENST00000550592 ARMT1Q9H993 441 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 ATP6V0A4Q9HBG4 840 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 GAPVD1Q14C86 1478 aa6.13□□□□□ -1.43
LIMA1-205ENST00000550592 CFAP69A5D8W1 941 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 F2RL2O00254 374 aa6.12□□□□□ -1.43
LIMA1-205ENST00000550592 FRS3O43559 492 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms