RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
PFDN5-210ENST00000550513 HTR4Q13639 388 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
PFDN5-210ENST00000550513 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 PPM1LQ5SGD2 360 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 PDXDC1Q6P996 788 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 LILRA6Q6PI73 481 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 NOSTRINQ8IVI9 506 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 DTWD2Q8NBA8 298 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 ARHGEF3Q9NR81 526 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 NUMBLQ9Y6R0 609 aa11.97□□□□□ -0.49
PFDN5-210ENST00000550513 NUP210Q8TEM1 1887 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-210ENST00000550513 ZFHX2Q9C0A1 2572 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-210ENST00000550513 PHLPP2Q6ZVD8 1323 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 FAM186AA6NE01 2351 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 ACKR2O00590 384 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
PFDN5-210ENST00000550513 CYP11B2P19099 503 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 MUTP22033 750 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 FSHRP23945 695 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 ZNF174Q15697 407 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 NAB2Q15742 525 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 GLRA4Q5JXX5 417 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 EEF1DP3Q658K8 133 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 GRASPQ7Z6J2 395 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-210ENST00000550513 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 SLC44A3Q8N4M1 653 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-210ENST00000550513 GPR152Q8TDT2 470 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 SNX27Q96L92 541 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 IFT74Q96LB3 600 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 CLSTN3Q9BQT9 956 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-210ENST00000550513 TBC1D17Q9HA65 648 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 USP20Q9Y2K6 914 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 GDAQ9Y2T3 454 aa11.96□□□□□ -0.49
PFDN5-210ENST00000550513 ZFP37Q9Y6Q3 630 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-210ENST00000550513 SPTBN4Q9H254 2564 aa11.96□□□□□ -0.5
PFDN5-210ENST00000550513 RIF1Q5UIP0 2472 aaKnown RBP11.96□□□□□ -0.5
PFDN5-210ENST00000550513 DCHS1Q96JQ0 3298 aa11.96□□□□□ -0.5
PFDN5-210ENST00000550513 ANHXE9PGG2 379 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 TMEM189-UBE2V1I3L0A0 370 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 CCL16O15467 120 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 HOXA9P31269 272 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 CCT6AP40227 531 aaKnown RBP11.95□□□□□ -0.5
PFDN5-210ENST00000550513 EFNA5P52803 228 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 ATF7IP2Q5U623 682 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
PFDN5-210ENST00000550513 APBB1IPQ7Z5R6 666 aaPredicted RBP11.95□□□□□ -0.5
PFDN5-210ENST00000550513 SLC7A14Q8TBB6 771 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 KIFAP3Q92845 792 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
PFDN5-210ENST00000550513 CXCL16Q9H2A7 254 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 NOL7Q9UMY1 257 aaKnown RBP11.95□□□□□ -0.5
PFDN5-210ENST00000550513 POLIQ9UNA4 740 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 KIF26AQ9ULI4 1882 aaPredicted RBP11.95□□□□□ -0.5
PFDN5-210ENST00000550513 WDR87Q6ZQQ6 2873 aa11.95□□□□□ -0.5
PFDN5-210ENST00000550513 ADAM12O43184 909 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 XYLBO75191 536 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 RBM25P49756 843 aaKnown RBP11.94□□□□□ -0.5
PFDN5-210ENST00000550513 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
PFDN5-210ENST00000550513 NTHL1P78549 312 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
PFDN5-210ENST00000550513 SPECC1Q5M775 1068 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 MTSS1LQ765P7 747 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-210ENST00000550513 SNX29Q8TEQ0 813 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 FGF14Q92915 247 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 UROC1Q96N76 676 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 SLC2A4RGQ9NR83 387 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 MTRRQ9UBK8 725 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 DAXXQ9UER7 740 aaPredicted RBP11.94□□□□□ -0.5
PFDN5-210ENST00000550513 LRWD1Q9UFC0 647 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 CDH7Q9ULB5 785 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 DENND4CQ5VZ89 1909 aa11.94□□□□□ -0.5
PFDN5-210ENST00000550513 OBSL1O75147 1896 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 CACNA1IQ9P0X4 2223 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 B3GAT3O94766 335 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 POU2F2P09086 479 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 FGFR3P22607 806 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 OR1D2P34982 312 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 TRAPPC10P48553 1259 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 CLCNKBP51801 687 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 YARSP54577 528 aaKnown RBP11.93□□□□□ -0.5
PFDN5-210ENST00000550513 NBR1Q14596 966 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 ECM1Q16610 540 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 ZNF568Q3ZCX4 644 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 AXDND1Q5T1B0 1012 aaPredicted RBP11.93□□□□□ -0.5
PFDN5-210ENST00000550513 PHLDB3Q6NSJ2 640 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 PARM1Q6UWI2 310 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 ADSSL1Q8N142 457 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 FAM184AQ8NB25 1140 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 PJA1Q8NG27 643 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms